Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.58■□□□□ 0.4
SLC28A2O43868 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC28A2O43868 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC28A2O43868 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.58■□□□□ 0.4
SLC28A2O43868 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.58■□□□□ 0.4
SLC28A2O43868 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC28A2O43868 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC28A2O43868 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC28A2O43868 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC28A2O43868 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC28A2O43868 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC28A2O43868 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC28A2O43868 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC28A2O43868 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC28A2O43868 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC28A2O43868 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC28A2O43868 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.57■□□□□ 0.4
SLC28A2O43868 AL645929.1-201ENST00000420084 975 ntBASIC17.57■□□□□ 0.4
SLC28A2O43868 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC28A2O43868 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.57■□□□□ 0.4
SLC28A2O43868 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC28A2O43868 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.57■□□□□ 0.4
SLC28A2O43868 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.57■□□□□ 0.4
SLC28A2O43868 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC28A2O43868 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC28A2O43868 LINC01711-201ENST00000598340 967 ntBASIC17.57■□□□□ 0.4
SLC28A2O43868 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.57■□□□□ 0.4
SLC28A2O43868 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC28A2O43868 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.57■□□□□ 0.4
SLC28A2O43868 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC28A2O43868 LETM1P2-201ENST00000597330 2178 ntBASIC17.57■□□□□ 0.4
SLC28A2O43868 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.57■□□□□ 0.4
SLC28A2O43868 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SLC28A2O43868 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
SLC28A2O43868 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.57■□□□□ 0.4
SLC28A2O43868 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC28A2O43868 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.57■□□□□ 0.4
SLC28A2O43868 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC28A2O43868 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.57■□□□□ 0.4
SLC28A2O43868 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC28A2O43868 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC28A2O43868 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC28A2O43868 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC28A2O43868 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC28A2O43868 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC28A2O43868 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLC28A2O43868 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
SLC28A2O43868 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLC28A2O43868 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC28A2O43868 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
SLC28A2O43868 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC28A2O43868 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC28A2O43868 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.56■□□□□ 0.4
SLC28A2O43868 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.56■□□□□ 0.4
SLC28A2O43868 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.56■□□□□ 0.4
SLC28A2O43868 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.56■□□□□ 0.4
SLC28A2O43868 AP003041.3-201ENST00000527151 707 ntBASIC17.56■□□□□ 0.4
SLC28A2O43868 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.56■□□□□ 0.4
SLC28A2O43868 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SLC28A2O43868 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.56■□□□□ 0.4
SLC28A2O43868 AC026471.1-201ENST00000564629 3026 ntBASIC17.56■□□□□ 0.4
SLC28A2O43868 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC28A2O43868 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC28A2O43868 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC28A2O43868 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
SLC28A2O43868 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.56■□□□□ 0.4
SLC28A2O43868 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.56■□□□□ 0.4
SLC28A2O43868 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.56■□□□□ 0.4
SLC28A2O43868 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC28A2O43868 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC28A2O43868 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.56■□□□□ 0.4
SLC28A2O43868 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
SLC28A2O43868 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC28A2O43868 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC28A2O43868 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC28A2O43868 HEIH-201ENST00000623091 1652 ntBASIC17.55■□□□□ 0.4
SLC28A2O43868 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SLC28A2O43868 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC28A2O43868 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SLC28A2O43868 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC28A2O43868 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC28A2O43868 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC28A2O43868 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC28A2O43868 NUS1P1-201ENST00000446295 882 ntBASIC17.55■□□□□ 0.4
SLC28A2O43868 BX276092.5-203ENST00000456199 560 ntBASIC17.55■□□□□ 0.4
SLC28A2O43868 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC28A2O43868 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC28A2O43868 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC28A2O43868 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.55■□□□□ 0.4
SLC28A2O43868 AC104692.2-201ENST00000603054 253 ntBASIC17.55■□□□□ 0.4
SLC28A2O43868 AL121672.3-201ENST00000608644 468 ntBASIC17.55■□□□□ 0.4
SLC28A2O43868 AC120114.3-201ENST00000611923 658 ntBASIC17.55■□□□□ 0.4
SLC28A2O43868 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC28A2O43868 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
SLC28A2O43868 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC28A2O43868 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC28A2O43868 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC28A2O43868 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.55■□□□□ 0.4
SLC28A2O43868 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC28A2O43868 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms