Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.25■□□□□ 0.19
TRAF3IP2O43734 AC079602.3-201ENST00000623931 403 ntBASIC16.25■□□□□ 0.19
TRAF3IP2O43734 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAF3IP2O43734 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
TRAF3IP2O43734 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TRAF3IP2O43734 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAF3IP2O43734 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAF3IP2O43734 REXO1L9P-201ENST00000604264 2108 ntBASIC16.25■□□□□ 0.19
TRAF3IP2O43734 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAF3IP2O43734 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.25■□□□□ 0.19
TRAF3IP2O43734 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAF3IP2O43734 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TRAF3IP2O43734 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAF3IP2O43734 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAF3IP2O43734 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAF3IP2O43734 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAF3IP2O43734 NOC2LP1-202ENST00000452600 2235 ntBASIC16.25■□□□□ 0.19
TRAF3IP2O43734 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAF3IP2O43734 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAF3IP2O43734 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
TRAF3IP2O43734 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.24■□□□□ 0.19
TRAF3IP2O43734 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.24■□□□□ 0.19
TRAF3IP2O43734 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.24■□□□□ 0.19
TRAF3IP2O43734 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAF3IP2O43734 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
TRAF3IP2O43734 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAF3IP2O43734 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAF3IP2O43734 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAF3IP2O43734 AC093010.1-201ENST00000473625 1624 ntBASIC16.24■□□□□ 0.19
TRAF3IP2O43734 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAF3IP2O43734 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAF3IP2O43734 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAF3IP2O43734 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAF3IP2O43734 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAF3IP2O43734 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAF3IP2O43734 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAF3IP2O43734 AC104076.2-201ENST00000448912 469 ntBASIC16.24■□□□□ 0.19
TRAF3IP2O43734 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.24■□□□□ 0.19
TRAF3IP2O43734 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.24■□□□□ 0.19
TRAF3IP2O43734 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAF3IP2O43734 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAF3IP2O43734 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.24■□□□□ 0.19
TRAF3IP2O43734 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TRAF3IP2O43734 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAF3IP2O43734 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAF3IP2O43734 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAF3IP2O43734 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAF3IP2O43734 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAF3IP2O43734 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAF3IP2O43734 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAF3IP2O43734 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TRAF3IP2O43734 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
TRAF3IP2O43734 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAF3IP2O43734 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAF3IP2O43734 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAF3IP2O43734 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAF3IP2O43734 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAF3IP2O43734 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAF3IP2O43734 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAF3IP2O43734 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
TRAF3IP2O43734 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.23■□□□□ 0.19
TRAF3IP2O43734 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAF3IP2O43734 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
TRAF3IP2O43734 KRT18P38-201ENST00000449496 1282 ntBASIC16.23■□□□□ 0.19
TRAF3IP2O43734 HOMER2P1-201ENST00000455653 964 ntBASIC16.23■□□□□ 0.19
TRAF3IP2O43734 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAF3IP2O43734 AL136038.4-201ENST00000603606 1261 ntBASIC16.23■□□□□ 0.19
TRAF3IP2O43734 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
TRAF3IP2O43734 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAF3IP2O43734 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAF3IP2O43734 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TRAF3IP2O43734 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAF3IP2O43734 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAF3IP2O43734 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAF3IP2O43734 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAF3IP2O43734 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAF3IP2O43734 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAF3IP2O43734 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
TRAF3IP2O43734 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAF3IP2O43734 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRAF3IP2O43734 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAF3IP2O43734 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAF3IP2O43734 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAF3IP2O43734 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRAF3IP2O43734 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAF3IP2O43734 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAF3IP2O43734 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAF3IP2O43734 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAF3IP2O43734 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAF3IP2O43734 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAF3IP2O43734 TMPOP1-202ENST00000424642 1267 ntBASIC16.22■□□□□ 0.19
TRAF3IP2O43734 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAF3IP2O43734 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAF3IP2O43734 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.22■□□□□ 0.19
TRAF3IP2O43734 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.22■□□□□ 0.19
TRAF3IP2O43734 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAF3IP2O43734 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAF3IP2O43734 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAF3IP2O43734 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAF3IP2O43734 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms