Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
FOXS1O43638 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.11■□□□□ 0.33
FOXS1O43638 LINC00265-3P-201ENST00000447588 903 ntBASIC17.11■□□□□ 0.33
FOXS1O43638 TOB2P1-201ENST00000469761 992 ntBASIC17.11■□□□□ 0.33
FOXS1O43638 AC068472.1-201ENST00000474589 881 ntBASIC17.11■□□□□ 0.33
FOXS1O43638 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FOXS1O43638 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
FOXS1O43638 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.11■□□□□ 0.33
FOXS1O43638 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.11■□□□□ 0.33
FOXS1O43638 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
FOXS1O43638 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXS1O43638 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXS1O43638 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.11■□□□□ 0.33
FOXS1O43638 AC009154.2-201ENST00000621177 724 ntBASIC17.11■□□□□ 0.33
FOXS1O43638 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FOXS1O43638 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
FOXS1O43638 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXS1O43638 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.11■□□□□ 0.33
FOXS1O43638 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXS1O43638 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FOXS1O43638 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.11■□□□□ 0.33
FOXS1O43638 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
FOXS1O43638 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FOXS1O43638 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.11■□□□□ 0.33
FOXS1O43638 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.1■□□□□ 0.33
FOXS1O43638 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXS1O43638 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXS1O43638 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.1■□□□□ 0.33
FOXS1O43638 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.1■□□□□ 0.33
FOXS1O43638 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
FOXS1O43638 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXS1O43638 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
FOXS1O43638 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.1■□□□□ 0.33
FOXS1O43638 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXS1O43638 KRT18P65-201ENST00000439811 1286 ntBASIC17.1■□□□□ 0.33
FOXS1O43638 AC091607.1-201ENST00000490318 1060 ntBASIC17.1■□□□□ 0.33
FOXS1O43638 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.1■□□□□ 0.33
FOXS1O43638 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
FOXS1O43638 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.1■□□□□ 0.33
FOXS1O43638 AL353801.3-201ENST00000609898 542 ntBASIC17.1■□□□□ 0.33
FOXS1O43638 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXS1O43638 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXS1O43638 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXS1O43638 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXS1O43638 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXS1O43638 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXS1O43638 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXS1O43638 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FOXS1O43638 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.1■□□□□ 0.33
FOXS1O43638 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.1■□□□□ 0.33
FOXS1O43638 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
FOXS1O43638 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXS1O43638 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.1■□□□□ 0.33
FOXS1O43638 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.1■□□□□ 0.33
FOXS1O43638 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FOXS1O43638 AL096828.2-201ENST00000567259 1965 ntBASIC17.09■□□□□ 0.33
FOXS1O43638 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXS1O43638 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXS1O43638 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.09■□□□□ 0.33
FOXS1O43638 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXS1O43638 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXS1O43638 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXS1O43638 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXS1O43638 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.09■□□□□ 0.33
FOXS1O43638 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.09■□□□□ 0.33
FOXS1O43638 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.09■□□□□ 0.33
FOXS1O43638 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.09■□□□□ 0.33
FOXS1O43638 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
FOXS1O43638 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXS1O43638 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FOXS1O43638 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXS1O43638 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FOXS1O43638 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.09■□□□□ 0.33
FOXS1O43638 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.09■□□□□ 0.33
FOXS1O43638 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
FOXS1O43638 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.09■□□□□ 0.33
FOXS1O43638 AC233702.3-201ENST00000578656 1387 ntBASIC17.09■□□□□ 0.33
FOXS1O43638 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.09■□□□□ 0.33
FOXS1O43638 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXS1O43638 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.09■□□□□ 0.33
FOXS1O43638 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXS1O43638 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXS1O43638 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXS1O43638 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXS1O43638 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.09■□□□□ 0.33
FOXS1O43638 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXS1O43638 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
FOXS1O43638 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
FOXS1O43638 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.08■□□□□ 0.33
FOXS1O43638 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
FOXS1O43638 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.08■□□□□ 0.33
FOXS1O43638 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
FOXS1O43638 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
FOXS1O43638 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
FOXS1O43638 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.08■□□□□ 0.33
FOXS1O43638 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
FOXS1O43638 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXS1O43638 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.08■□□□□ 0.32
FOXS1O43638 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
FOXS1O43638 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms