Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC23.15■■□□□ 1.3
ABCC4O15439 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
ABCC4O15439 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC23.15■■□□□ 1.3
ABCC4O15439 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC23.15■■□□□ 1.3
ABCC4O15439 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
ABCC4O15439 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC23.15■■□□□ 1.3
ABCC4O15439 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
ABCC4O15439 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ABCC4O15439 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ABCC4O15439 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ABCC4O15439 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC23.15■■□□□ 1.3
ABCC4O15439 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ABCC4O15439 NARF-204ENST00000390006 1766 ntTSL 2 BASIC23.15■■□□□ 1.3
ABCC4O15439 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
ABCC4O15439 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC23.15■■□□□ 1.3
ABCC4O15439 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
ABCC4O15439 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
ABCC4O15439 AL096828.2-201ENST00000567259 1965 ntBASIC23.15■■□□□ 1.3
ABCC4O15439 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
ABCC4O15439 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ABCC4O15439 RNF165-205ENST00000588679 2904 ntBASIC23.15■■□□□ 1.3
ABCC4O15439 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
ABCC4O15439 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
ABCC4O15439 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
ABCC4O15439 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
ABCC4O15439 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
ABCC4O15439 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
ABCC4O15439 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
ABCC4O15439 PNN-202ENST00000553331 656 ntTSL 3 BASIC23.14■■□□□ 1.3
ABCC4O15439 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC23.14■■□□□ 1.3
ABCC4O15439 TEN1-204ENST00000588202 862 ntTSL 3 BASIC23.14■■□□□ 1.3
ABCC4O15439 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.3
ABCC4O15439 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
ABCC4O15439 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
ABCC4O15439 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.3
ABCC4O15439 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.3
ABCC4O15439 Z83836.1-201ENST00000624605 1642 ntBASIC23.14■■□□□ 1.3
ABCC4O15439 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
ABCC4O15439 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC23.14■■□□□ 1.29
ABCC4O15439 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ABCC4O15439 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ABCC4O15439 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ABCC4O15439 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ABCC4O15439 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
ABCC4O15439 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
ABCC4O15439 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
ABCC4O15439 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ABCC4O15439 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
ABCC4O15439 AC120498.9-201ENST00000339021 3867 ntBASIC23.14■■□□□ 1.29
ABCC4O15439 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
ABCC4O15439 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC23.13■■□□□ 1.29
ABCC4O15439 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ABCC4O15439 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ABCC4O15439 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC23.13■■□□□ 1.29
ABCC4O15439 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC23.13■■□□□ 1.29
ABCC4O15439 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC23.13■■□□□ 1.29
ABCC4O15439 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
ABCC4O15439 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC23.13■■□□□ 1.29
ABCC4O15439 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ABCC4O15439 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC23.13■■□□□ 1.29
ABCC4O15439 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ABCC4O15439 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC23.13■■□□□ 1.29
ABCC4O15439 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ABCC4O15439 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ABCC4O15439 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ABCC4O15439 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ABCC4O15439 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ABCC4O15439 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ABCC4O15439 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ABCC4O15439 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ABCC4O15439 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
ABCC4O15439 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC23.12■■□□□ 1.29
ABCC4O15439 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ABCC4O15439 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC23.12■■□□□ 1.29
ABCC4O15439 AC009078.2-202ENST00000463353 338 ntBASIC23.12■■□□□ 1.29
ABCC4O15439 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC23.12■■□□□ 1.29
ABCC4O15439 AL031008.1-201ENST00000619963 541 ntBASIC23.12■■□□□ 1.29
ABCC4O15439 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
ABCC4O15439 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
ABCC4O15439 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
ABCC4O15439 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
ABCC4O15439 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
ABCC4O15439 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
ABCC4O15439 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ABCC4O15439 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ABCC4O15439 LINC00167-201ENST00000530583 1419 ntBASIC23.12■■□□□ 1.29
ABCC4O15439 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC23.12■■□□□ 1.29
ABCC4O15439 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
ABCC4O15439 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ABCC4O15439 BAALC-202ENST00000306391 243 ntTSL 5 BASIC23.11■■□□□ 1.29
ABCC4O15439 BAALC-204ENST00000330955 222 ntTSL 5 BASIC23.11■■□□□ 1.29
ABCC4O15439 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ABCC4O15439 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC23.11■■□□□ 1.29
ABCC4O15439 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
ABCC4O15439 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
ABCC4O15439 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC23.11■■□□□ 1.29
ABCC4O15439 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
ABCC4O15439 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ABCC4O15439 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ABCC4O15439 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms