Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RTCAO00442 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTCAO00442 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTCAO00442 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTCAO00442 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.4■□□□□ 0.38
RTCAO00442 AL096828.2-201ENST00000567259 1965 ntBASIC17.4■□□□□ 0.38
RTCAO00442 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTCAO00442 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RTCAO00442 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTCAO00442 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTCAO00442 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTCAO00442 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTCAO00442 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTCAO00442 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTCAO00442 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTCAO00442 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.4■□□□□ 0.38
RTCAO00442 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.4■□□□□ 0.38
RTCAO00442 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.4■□□□□ 0.38
RTCAO00442 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTCAO00442 RASA4DP-201ENST00000460726 1199 ntBASIC17.4■□□□□ 0.38
RTCAO00442 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.4■□□□□ 0.38
RTCAO00442 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RTCAO00442 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.4■□□□□ 0.38
RTCAO00442 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.4■□□□□ 0.38
RTCAO00442 AL031432.5-201ENST00000641059 760 ntBASIC17.4■□□□□ 0.38
RTCAO00442 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTCAO00442 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.4■□□□□ 0.38
RTCAO00442 AL133373.2-201ENST00000623187 2828 ntBASIC17.4■□□□□ 0.38
RTCAO00442 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
RTCAO00442 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
RTCAO00442 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RTCAO00442 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.4■□□□□ 0.38
RTCAO00442 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RTCAO00442 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
RTCAO00442 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RTCAO00442 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
RTCAO00442 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RTCAO00442 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
RTCAO00442 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
RTCAO00442 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RTCAO00442 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.39■□□□□ 0.38
RTCAO00442 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTCAO00442 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RTCAO00442 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
RTCAO00442 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.39■□□□□ 0.37
RTCAO00442 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
RTCAO00442 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
RTCAO00442 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTCAO00442 AK4P3-201ENST00000418260 669 ntBASIC17.39■□□□□ 0.37
RTCAO00442 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.39■□□□□ 0.37
RTCAO00442 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.39■□□□□ 0.37
RTCAO00442 KRT18P21-201ENST00000515767 1272 ntBASIC17.39■□□□□ 0.37
RTCAO00442 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.39■□□□□ 0.37
RTCAO00442 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RTCAO00442 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.39■□□□□ 0.37
RTCAO00442 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.39■□□□□ 0.37
RTCAO00442 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.39■□□□□ 0.37
RTCAO00442 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RTCAO00442 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.37
RTCAO00442 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTCAO00442 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RTCAO00442 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTCAO00442 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTCAO00442 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTCAO00442 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.39■□□□□ 0.37
RTCAO00442 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTCAO00442 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.39■□□□□ 0.37
RTCAO00442 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RTCAO00442 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.38■□□□□ 0.37
RTCAO00442 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.38■□□□□ 0.37
RTCAO00442 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTCAO00442 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTCAO00442 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.38■□□□□ 0.37
RTCAO00442 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RTCAO00442 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RTCAO00442 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RTCAO00442 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTCAO00442 NOC2LP1-202ENST00000452600 2235 ntBASIC17.38■□□□□ 0.37
RTCAO00442 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTCAO00442 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.38■□□□□ 0.37
RTCAO00442 KRT18P38-201ENST00000449496 1282 ntBASIC17.38■□□□□ 0.37
RTCAO00442 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.38■□□□□ 0.37
RTCAO00442 AC034232.1-201ENST00000506026 1064 ntBASIC17.38■□□□□ 0.37
RTCAO00442 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTCAO00442 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.38■□□□□ 0.37
RTCAO00442 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.38■□□□□ 0.37
RTCAO00442 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.38■□□□□ 0.37
RTCAO00442 AC079602.3-201ENST00000623931 403 ntBASIC17.38■□□□□ 0.37
RTCAO00442 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTCAO00442 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.38■□□□□ 0.37
RTCAO00442 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTCAO00442 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTCAO00442 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RTCAO00442 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTCAO00442 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
RTCAO00442 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTCAO00442 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RTCAO00442 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RTCAO00442 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.37■□□□□ 0.37
RTCAO00442 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms