Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.83■□□□□ 0.44
EIF3FO00303 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
EIF3FO00303 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
EIF3FO00303 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
EIF3FO00303 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
EIF3FO00303 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
EIF3FO00303 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
EIF3FO00303 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
EIF3FO00303 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
EIF3FO00303 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
EIF3FO00303 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
EIF3FO00303 RNF152P1-201ENST00000397754 604 ntBASIC17.82■□□□□ 0.44
EIF3FO00303 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.82■□□□□ 0.44
EIF3FO00303 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
EIF3FO00303 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.82■□□□□ 0.44
EIF3FO00303 AL136038.4-201ENST00000603606 1261 ntBASIC17.82■□□□□ 0.44
EIF3FO00303 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.82■□□□□ 0.44
EIF3FO00303 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
EIF3FO00303 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.82■□□□□ 0.44
EIF3FO00303 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
EIF3FO00303 NOC2LP2-201ENST00000407594 1944 ntBASIC17.82■□□□□ 0.44
EIF3FO00303 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
EIF3FO00303 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
EIF3FO00303 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
EIF3FO00303 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.81■□□□□ 0.44
EIF3FO00303 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EIF3FO00303 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
EIF3FO00303 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
EIF3FO00303 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
EIF3FO00303 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
EIF3FO00303 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.81■□□□□ 0.44
EIF3FO00303 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
EIF3FO00303 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
EIF3FO00303 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
EIF3FO00303 HLA-F-220ENST00000434407 884 ntBASIC17.81■□□□□ 0.44
EIF3FO00303 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.81■□□□□ 0.44
EIF3FO00303 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.81■□□□□ 0.44
EIF3FO00303 AC024563.2-201ENST00000603282 481 ntBASIC17.81■□□□□ 0.44
EIF3FO00303 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
EIF3FO00303 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
EIF3FO00303 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.81■□□□□ 0.44
EIF3FO00303 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
EIF3FO00303 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
EIF3FO00303 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
EIF3FO00303 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EIF3FO00303 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.81■□□□□ 0.44
EIF3FO00303 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.81■□□□□ 0.44
EIF3FO00303 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
EIF3FO00303 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
EIF3FO00303 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
EIF3FO00303 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
EIF3FO00303 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
EIF3FO00303 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
EIF3FO00303 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
EIF3FO00303 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
EIF3FO00303 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
EIF3FO00303 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EIF3FO00303 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EIF3FO00303 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EIF3FO00303 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.8■□□□□ 0.44
EIF3FO00303 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
EIF3FO00303 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
EIF3FO00303 AL391807.1-203ENST00000604392 2365 ntBASIC17.8■□□□□ 0.44
EIF3FO00303 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.8■□□□□ 0.44
EIF3FO00303 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.8■□□□□ 0.44
EIF3FO00303 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.8■□□□□ 0.44
EIF3FO00303 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
EIF3FO00303 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EIF3FO00303 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
EIF3FO00303 FAM8A6P-201ENST00000407496 1135 ntBASIC17.8■□□□□ 0.44
EIF3FO00303 TSPY5P-201ENST00000426936 936 ntBASIC17.8■□□□□ 0.44
EIF3FO00303 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
EIF3FO00303 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EIF3FO00303 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
EIF3FO00303 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
EIF3FO00303 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.8■□□□□ 0.44
EIF3FO00303 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EIF3FO00303 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EIF3FO00303 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EIF3FO00303 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
EIF3FO00303 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
EIF3FO00303 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EIF3FO00303 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
EIF3FO00303 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
EIF3FO00303 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EIF3FO00303 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
EIF3FO00303 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
EIF3FO00303 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
EIF3FO00303 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
EIF3FO00303 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
EIF3FO00303 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
EIF3FO00303 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
EIF3FO00303 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
EIF3FO00303 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EIF3FO00303 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EIF3FO00303 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
EIF3FO00303 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
EIF3FO00303 SPDYE15P-201ENST00000424157 909 ntBASIC17.79■□□□□ 0.44
EIF3FO00303 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.79■□□□□ 0.44
EIF3FO00303 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms