Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM49BA6NDI0 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.1■□□□□ 0.81
TRIM49BA6NDI0 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.1■□□□□ 0.81
TRIM49BA6NDI0 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.1■□□□□ 0.81
TRIM49BA6NDI0 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM49BA6NDI0 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
TRIM49BA6NDI0 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
TRIM49BA6NDI0 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM49BA6NDI0 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM49BA6NDI0 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM49BA6NDI0 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM49BA6NDI0 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.1■□□□□ 0.81
TRIM49BA6NDI0 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
TRIM49BA6NDI0 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM49BA6NDI0 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM49BA6NDI0 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM49BA6NDI0 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM49BA6NDI0 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.09■□□□□ 0.81
TRIM49BA6NDI0 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM49BA6NDI0 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.09■□□□□ 0.81
TRIM49BA6NDI0 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM49BA6NDI0 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM49BA6NDI0 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
TRIM49BA6NDI0 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.09■□□□□ 0.81
TRIM49BA6NDI0 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM49BA6NDI0 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
TRIM49BA6NDI0 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
TRIM49BA6NDI0 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.09■□□□□ 0.81
TRIM49BA6NDI0 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM49BA6NDI0 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.09■□□□□ 0.81
TRIM49BA6NDI0 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.09■□□□□ 0.81
TRIM49BA6NDI0 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM49BA6NDI0 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM49BA6NDI0 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM49BA6NDI0 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM49BA6NDI0 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TRIM49BA6NDI0 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.09■□□□□ 0.81
TRIM49BA6NDI0 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM49BA6NDI0 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.09■□□□□ 0.81
TRIM49BA6NDI0 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM49BA6NDI0 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM49BA6NDI0 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.08■□□□□ 0.81
TRIM49BA6NDI0 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM49BA6NDI0 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM49BA6NDI0 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM49BA6NDI0 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
TRIM49BA6NDI0 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
TRIM49BA6NDI0 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM49BA6NDI0 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM49BA6NDI0 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM49BA6NDI0 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.08■□□□□ 0.81
TRIM49BA6NDI0 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM49BA6NDI0 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
TRIM49BA6NDI0 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM49BA6NDI0 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.81
TRIM49BA6NDI0 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
TRIM49BA6NDI0 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM49BA6NDI0 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM49BA6NDI0 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.08■□□□□ 0.81
TRIM49BA6NDI0 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM49BA6NDI0 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.08■□□□□ 0.81
TRIM49BA6NDI0 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM49BA6NDI0 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.08■□□□□ 0.81
TRIM49BA6NDI0 SLC25A6P5-201ENST00000435663 894 ntBASIC20.08■□□□□ 0.81
TRIM49BA6NDI0 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.08■□□□□ 0.81
TRIM49BA6NDI0 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.08■□□□□ 0.81
TRIM49BA6NDI0 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRIM49BA6NDI0 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRIM49BA6NDI0 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.08■□□□□ 0.8
TRIM49BA6NDI0 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TRIM49BA6NDI0 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRIM49BA6NDI0 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRIM49BA6NDI0 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRIM49BA6NDI0 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.08■□□□□ 0.8
TRIM49BA6NDI0 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TRIM49BA6NDI0 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
TRIM49BA6NDI0 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM49BA6NDI0 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM49BA6NDI0 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM49BA6NDI0 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.07■□□□□ 0.8
TRIM49BA6NDI0 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM49BA6NDI0 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM49BA6NDI0 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.07■□□□□ 0.8
TRIM49BA6NDI0 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.07■□□□□ 0.8
TRIM49BA6NDI0 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM49BA6NDI0 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM49BA6NDI0 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.07■□□□□ 0.8
TRIM49BA6NDI0 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.07■□□□□ 0.8
TRIM49BA6NDI0 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.07■□□□□ 0.8
TRIM49BA6NDI0 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.07■□□□□ 0.8
TRIM49BA6NDI0 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM49BA6NDI0 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.07■□□□□ 0.8
TRIM49BA6NDI0 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.07■□□□□ 0.8
TRIM49BA6NDI0 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.07■□□□□ 0.8
TRIM49BA6NDI0 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM49BA6NDI0 AC066615.1-201ENST00000640911 628 ntBASIC20.07■□□□□ 0.8
TRIM49BA6NDI0 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM49BA6NDI0 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM49BA6NDI0 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
TRIM49BA6NDI0 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms