Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SBNO1A3KN83 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SBNO1A3KN83 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SBNO1A3KN83 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC24.59■■□□□ 1.53
SBNO1A3KN83 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SBNO1A3KN83 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SBNO1A3KN83 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC24.59■■□□□ 1.53
SBNO1A3KN83 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SBNO1A3KN83 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC24.59■■□□□ 1.53
SBNO1A3KN83 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
SBNO1A3KN83 ETFA-208ENST00000559602 792 ntTSL 3 BASIC24.59■■□□□ 1.53
SBNO1A3KN83 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC24.59■■□□□ 1.53
SBNO1A3KN83 RPS15-207ENST00000591032 550 ntTSL 3 BASIC24.59■■□□□ 1.53
SBNO1A3KN83 COPE-211ENST00000600932 1144 ntTSL 5 BASIC24.59■■□□□ 1.53
SBNO1A3KN83 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC24.59■■□□□ 1.53
SBNO1A3KN83 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SBNO1A3KN83 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
SBNO1A3KN83 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SBNO1A3KN83 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SBNO1A3KN83 USP39-202ENST00000409025 1946 ntTSL 5 BASIC24.59■■□□□ 1.53
SBNO1A3KN83 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
SBNO1A3KN83 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SBNO1A3KN83 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SBNO1A3KN83 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC24.58■■□□□ 1.53
SBNO1A3KN83 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
SBNO1A3KN83 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SBNO1A3KN83 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SBNO1A3KN83 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
SBNO1A3KN83 MSRA-206ENST00000521209 814 ntTSL 3 BASIC24.58■■□□□ 1.53
SBNO1A3KN83 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC24.58■■□□□ 1.53
SBNO1A3KN83 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SBNO1A3KN83 LINC00602-201ENST00000629776 2065 ntBASIC24.58■■□□□ 1.53
SBNO1A3KN83 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
SBNO1A3KN83 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC24.58■■□□□ 1.53
SBNO1A3KN83 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC24.58■■□□□ 1.53
SBNO1A3KN83 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC24.58■■□□□ 1.53
SBNO1A3KN83 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
SBNO1A3KN83 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC24.58■■□□□ 1.52
SBNO1A3KN83 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
SBNO1A3KN83 LBH-203ENST00000404397 543 ntTSL 4 BASIC24.57■■□□□ 1.52
SBNO1A3KN83 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
SBNO1A3KN83 AC023274.1-201ENST00000418278 595 ntBASIC24.57■■□□□ 1.52
SBNO1A3KN83 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC24.57■■□□□ 1.52
SBNO1A3KN83 YBX1P5-201ENST00000509441 847 ntBASIC24.57■■□□□ 1.52
SBNO1A3KN83 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
SBNO1A3KN83 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC24.57■■□□□ 1.52
SBNO1A3KN83 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC24.57■■□□□ 1.52
SBNO1A3KN83 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC24.57■■□□□ 1.52
SBNO1A3KN83 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SBNO1A3KN83 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
SBNO1A3KN83 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
SBNO1A3KN83 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SBNO1A3KN83 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SBNO1A3KN83 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
SBNO1A3KN83 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
SBNO1A3KN83 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC24.57■■□□□ 1.52
SBNO1A3KN83 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
SBNO1A3KN83 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SBNO1A3KN83 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC24.56■■□□□ 1.52
SBNO1A3KN83 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SBNO1A3KN83 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SBNO1A3KN83 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
SBNO1A3KN83 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
SBNO1A3KN83 CD9-202ENST00000382515 1229 ntTSL 5 BASIC24.56■■□□□ 1.52
SBNO1A3KN83 AC064836.3-201ENST00000607928 673 ntBASIC24.56■■□□□ 1.52
SBNO1A3KN83 AC073592.4-201ENST00000623827 446 ntBASIC24.56■■□□□ 1.52
SBNO1A3KN83 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC24.56■■□□□ 1.52
SBNO1A3KN83 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC24.56■■□□□ 1.52
SBNO1A3KN83 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SBNO1A3KN83 AC079776.2-201ENST00000641154 1609 ntBASIC24.56■■□□□ 1.52
SBNO1A3KN83 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SBNO1A3KN83 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC24.56■■□□□ 1.52
SBNO1A3KN83 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC24.56■■□□□ 1.52
SBNO1A3KN83 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
SBNO1A3KN83 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
SBNO1A3KN83 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SBNO1A3KN83 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
SBNO1A3KN83 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SBNO1A3KN83 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
SBNO1A3KN83 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SBNO1A3KN83 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SBNO1A3KN83 AC211486.1-202ENST00000416371 468 ntBASIC24.55■■□□□ 1.52
SBNO1A3KN83 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC24.55■■□□□ 1.52
SBNO1A3KN83 AC211476.1-201ENST00000503899 468 ntBASIC24.55■■□□□ 1.52
SBNO1A3KN83 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC24.55■■□□□ 1.52
SBNO1A3KN83 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC24.55■■□□□ 1.52
SBNO1A3KN83 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC24.55■■□□□ 1.52
SBNO1A3KN83 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SBNO1A3KN83 MYLKP1-201ENST00000509077 1580 ntBASIC24.55■■□□□ 1.52
SBNO1A3KN83 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC24.55■■□□□ 1.52
SBNO1A3KN83 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC24.55■■□□□ 1.52
SBNO1A3KN83 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SBNO1A3KN83 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC24.55■■□□□ 1.52
SBNO1A3KN83 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC24.55■■□□□ 1.52
SBNO1A3KN83 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SBNO1A3KN83 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
SBNO1A3KN83 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC24.55■■□□□ 1.52
SBNO1A3KN83 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SBNO1A3KN83 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC24.54■■□□□ 1.52
SBNO1A3KN83 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms