Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM238LA0A1B0GVL6 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM238LA0A1B0GVL6 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC12.79□□□□□ -0.36
TMEM238LA0A1B0GVL6 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM238LA0A1B0GVL6 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
TMEM238LA0A1B0GVL6 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
TMEM238LA0A1B0GVL6 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
TMEM238LA0A1B0GVL6 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC12.79□□□□□ -0.36
TMEM238LA0A1B0GVL6 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC12.79□□□□□ -0.36
TMEM238LA0A1B0GVL6 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM238LA0A1B0GVL6 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
TMEM238LA0A1B0GVL6 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC12.79□□□□□ -0.36
TMEM238LA0A1B0GVL6 SYT6-210ENST00000641643 1587 ntBASIC12.79□□□□□ -0.36
TMEM238LA0A1B0GVL6 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
TMEM238LA0A1B0GVL6 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM238LA0A1B0GVL6 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM238LA0A1B0GVL6 BX664725.1-201ENST00000438252 379 ntBASIC12.79□□□□□ -0.36
TMEM238LA0A1B0GVL6 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM238LA0A1B0GVL6 MIR4508-201ENST00000584178 70 ntBASIC12.79□□□□□ -0.36
TMEM238LA0A1B0GVL6 AC099791.2-201ENST00000605725 427 ntBASIC12.79□□□□□ -0.36
TMEM238LA0A1B0GVL6 EXOG-217ENST00000630638 197 ntTSL 5 BASIC12.79□□□□□ -0.36
TMEM238LA0A1B0GVL6 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM238LA0A1B0GVL6 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC12.79□□□□□ -0.36
TMEM238LA0A1B0GVL6 NTM-206ENST00000427481 2583 ntTSL 5 BASIC12.79□□□□□ -0.36
TMEM238LA0A1B0GVL6 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM238LA0A1B0GVL6 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM238LA0A1B0GVL6 PHGDH-210ENST00000641115 1638 ntBASIC12.79□□□□□ -0.36
TMEM238LA0A1B0GVL6 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC12.79□□□□□ -0.36
TMEM238LA0A1B0GVL6 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.79□□□□□ -0.36
TMEM238LA0A1B0GVL6 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC12.79□□□□□ -0.36
TMEM238LA0A1B0GVL6 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM238LA0A1B0GVL6 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM238LA0A1B0GVL6 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
TMEM238LA0A1B0GVL6 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC12.79□□□□□ -0.36
TMEM238LA0A1B0GVL6 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM238LA0A1B0GVL6 MARVELD2-201ENST00000325631 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM238LA0A1B0GVL6 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM238LA0A1B0GVL6 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 AC005224.4-201ENST00000583262 1652 ntBASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 ABHD17AP4-201ENST00000411545 909 ntBASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 DUX4L18-201ENST00000553347 1267 ntBASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 KRT16P2-201ENST00000414673 1423 ntBASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 HSPA7-201ENST00000445535 1927 ntBASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC12.78□□□□□ -0.36
TMEM238LA0A1B0GVL6 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
TMEM238LA0A1B0GVL6 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC12.77□□□□□ -0.36
TMEM238LA0A1B0GVL6 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
TMEM238LA0A1B0GVL6 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC12.77□□□□□ -0.36
TMEM238LA0A1B0GVL6 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.77□□□□□ -0.36
TMEM238LA0A1B0GVL6 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC12.77□□□□□ -0.36
TMEM238LA0A1B0GVL6 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TMEM238LA0A1B0GVL6 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms