Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CYP46A1Q9Y6A2 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CYP46A1Q9Y6A2 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
CYP46A1Q9Y6A2 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.66■■□□□ 1.06
CYP46A1Q9Y6A2 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CYP46A1Q9Y6A2 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.66■■□□□ 1.06
CYP46A1Q9Y6A2 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.66■■□□□ 1.06
CYP46A1Q9Y6A2 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.66■■□□□ 1.06
CYP46A1Q9Y6A2 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.66■■□□□ 1.06
CYP46A1Q9Y6A2 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.66■■□□□ 1.06
CYP46A1Q9Y6A2 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CYP46A1Q9Y6A2 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CYP46A1Q9Y6A2 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC21.66■■□□□ 1.06
CYP46A1Q9Y6A2 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CYP46A1Q9Y6A2 EML3-217ENST00000531557 2509 ntTSL 5 BASIC21.66■■□□□ 1.06
CYP46A1Q9Y6A2 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CYP46A1Q9Y6A2 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CYP46A1Q9Y6A2 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CYP46A1Q9Y6A2 AP000997.3-201ENST00000623333 2250 ntBASIC21.66■■□□□ 1.06
CYP46A1Q9Y6A2 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CYP46A1Q9Y6A2 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CYP46A1Q9Y6A2 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CYP46A1Q9Y6A2 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC21.65■■□□□ 1.06
CYP46A1Q9Y6A2 SP100-208ENST00000427101 1922 ntTSL 2 BASIC21.65■■□□□ 1.06
CYP46A1Q9Y6A2 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CYP46A1Q9Y6A2 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CYP46A1Q9Y6A2 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CYP46A1Q9Y6A2 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.65■■□□□ 1.06
CYP46A1Q9Y6A2 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC21.65■■□□□ 1.06
CYP46A1Q9Y6A2 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.65■■□□□ 1.06
CYP46A1Q9Y6A2 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.65■■□□□ 1.06
CYP46A1Q9Y6A2 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC21.65■■□□□ 1.06
CYP46A1Q9Y6A2 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CYP46A1Q9Y6A2 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CYP46A1Q9Y6A2 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CYP46A1Q9Y6A2 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CYP46A1Q9Y6A2 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21.65■■□□□ 1.06
CYP46A1Q9Y6A2 AC093010.1-201ENST00000473625 1624 ntBASIC21.65■■□□□ 1.06
CYP46A1Q9Y6A2 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.65■■□□□ 1.06
CYP46A1Q9Y6A2 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CYP46A1Q9Y6A2 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CYP46A1Q9Y6A2 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CYP46A1Q9Y6A2 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CYP46A1Q9Y6A2 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CYP46A1Q9Y6A2 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC21.65■■□□□ 1.06
CYP46A1Q9Y6A2 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CYP46A1Q9Y6A2 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CYP46A1Q9Y6A2 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CYP46A1Q9Y6A2 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CYP46A1Q9Y6A2 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CYP46A1Q9Y6A2 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CYP46A1Q9Y6A2 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CYP46A1Q9Y6A2 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CYP46A1Q9Y6A2 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CYP46A1Q9Y6A2 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CYP46A1Q9Y6A2 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.64■■□□□ 1.05
CYP46A1Q9Y6A2 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
CYP46A1Q9Y6A2 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CYP46A1Q9Y6A2 NEK4P2-201ENST00000580004 1012 ntBASIC21.64■■□□□ 1.05
CYP46A1Q9Y6A2 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.64■■□□□ 1.05
CYP46A1Q9Y6A2 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.64■■□□□ 1.05
CYP46A1Q9Y6A2 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CYP46A1Q9Y6A2 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CYP46A1Q9Y6A2 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CYP46A1Q9Y6A2 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC21.64■■□□□ 1.05
CYP46A1Q9Y6A2 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CYP46A1Q9Y6A2 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC21.64■■□□□ 1.05
CYP46A1Q9Y6A2 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
CYP46A1Q9Y6A2 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CYP46A1Q9Y6A2 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC21.64■■□□□ 1.05
CYP46A1Q9Y6A2 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC21.64■■□□□ 1.05
CYP46A1Q9Y6A2 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
CYP46A1Q9Y6A2 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CYP46A1Q9Y6A2 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.63■■□□□ 1.05
CYP46A1Q9Y6A2 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CYP46A1Q9Y6A2 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CYP46A1Q9Y6A2 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.63■■□□□ 1.05
CYP46A1Q9Y6A2 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CYP46A1Q9Y6A2 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CYP46A1Q9Y6A2 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.63■■□□□ 1.05
CYP46A1Q9Y6A2 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.63■■□□□ 1.05
CYP46A1Q9Y6A2 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.63■■□□□ 1.05
CYP46A1Q9Y6A2 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CYP46A1Q9Y6A2 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CYP46A1Q9Y6A2 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
CYP46A1Q9Y6A2 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CYP46A1Q9Y6A2 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CYP46A1Q9Y6A2 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CYP46A1Q9Y6A2 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
CYP46A1Q9Y6A2 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CYP46A1Q9Y6A2 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CYP46A1Q9Y6A2 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CYP46A1Q9Y6A2 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CYP46A1Q9Y6A2 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CYP46A1Q9Y6A2 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CYP46A1Q9Y6A2 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CYP46A1Q9Y6A2 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CYP46A1Q9Y6A2 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CYP46A1Q9Y6A2 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CYP46A1Q9Y6A2 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms