Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.03■□□□□ 0.64
HCFC2Q9Y5Z7 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
HCFC2Q9Y5Z7 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.03■□□□□ 0.64
HCFC2Q9Y5Z7 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HCFC2Q9Y5Z7 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.03■□□□□ 0.64
HCFC2Q9Y5Z7 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
HCFC2Q9Y5Z7 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.03■□□□□ 0.64
HCFC2Q9Y5Z7 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.03■□□□□ 0.64
HCFC2Q9Y5Z7 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
HCFC2Q9Y5Z7 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.03■□□□□ 0.64
HCFC2Q9Y5Z7 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.03■□□□□ 0.64
HCFC2Q9Y5Z7 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HCFC2Q9Y5Z7 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HCFC2Q9Y5Z7 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
HCFC2Q9Y5Z7 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HCFC2Q9Y5Z7 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.03■□□□□ 0.64
HCFC2Q9Y5Z7 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HCFC2Q9Y5Z7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.03■□□□□ 0.64
HCFC2Q9Y5Z7 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
HCFC2Q9Y5Z7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HCFC2Q9Y5Z7 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HCFC2Q9Y5Z7 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.02■□□□□ 0.64
HCFC2Q9Y5Z7 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HCFC2Q9Y5Z7 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HCFC2Q9Y5Z7 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HCFC2Q9Y5Z7 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HCFC2Q9Y5Z7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
HCFC2Q9Y5Z7 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.02■□□□□ 0.64
HCFC2Q9Y5Z7 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.02■□□□□ 0.64
HCFC2Q9Y5Z7 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HCFC2Q9Y5Z7 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
HCFC2Q9Y5Z7 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
HCFC2Q9Y5Z7 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.02■□□□□ 0.64
HCFC2Q9Y5Z7 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HCFC2Q9Y5Z7 UPF3AP3-201ENST00000420996 769 ntBASIC19.02■□□□□ 0.64
HCFC2Q9Y5Z7 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
HCFC2Q9Y5Z7 RNA5SP415-201ENST00000517246 115 ntBASIC19.02■□□□□ 0.64
HCFC2Q9Y5Z7 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.02■□□□□ 0.64
HCFC2Q9Y5Z7 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.02■□□□□ 0.64
HCFC2Q9Y5Z7 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.02■□□□□ 0.64
HCFC2Q9Y5Z7 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.02■□□□□ 0.64
HCFC2Q9Y5Z7 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
HCFC2Q9Y5Z7 AL139288.1-201ENST00000623748 933 ntBASIC19.02■□□□□ 0.64
HCFC2Q9Y5Z7 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HCFC2Q9Y5Z7 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HCFC2Q9Y5Z7 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
HCFC2Q9Y5Z7 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HCFC2Q9Y5Z7 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HCFC2Q9Y5Z7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
HCFC2Q9Y5Z7 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HCFC2Q9Y5Z7 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.01■□□□□ 0.63
HCFC2Q9Y5Z7 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.01■□□□□ 0.63
HCFC2Q9Y5Z7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HCFC2Q9Y5Z7 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HCFC2Q9Y5Z7 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HCFC2Q9Y5Z7 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HCFC2Q9Y5Z7 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HCFC2Q9Y5Z7 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.01■□□□□ 0.63
HCFC2Q9Y5Z7 KRT18P3-201ENST00000451602 1288 ntBASIC19.01■□□□□ 0.63
HCFC2Q9Y5Z7 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.01■□□□□ 0.63
HCFC2Q9Y5Z7 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.01■□□□□ 0.63
HCFC2Q9Y5Z7 AC010327.4-202ENST00000591484 748 ntBASIC19.01■□□□□ 0.63
HCFC2Q9Y5Z7 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HCFC2Q9Y5Z7 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HCFC2Q9Y5Z7 AC008735.5-201ENST00000623544 497 ntBASIC19.01■□□□□ 0.63
HCFC2Q9Y5Z7 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HCFC2Q9Y5Z7 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HCFC2Q9Y5Z7 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HCFC2Q9Y5Z7 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HCFC2Q9Y5Z7 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HCFC2Q9Y5Z7 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
HCFC2Q9Y5Z7 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HCFC2Q9Y5Z7 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19■□□□□ 0.63
HCFC2Q9Y5Z7 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HCFC2Q9Y5Z7 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19■□□□□ 0.63
HCFC2Q9Y5Z7 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19■□□□□ 0.63
HCFC2Q9Y5Z7 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HCFC2Q9Y5Z7 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HCFC2Q9Y5Z7 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19■□□□□ 0.63
HCFC2Q9Y5Z7 KRT18P65-201ENST00000439811 1286 ntBASIC19■□□□□ 0.63
HCFC2Q9Y5Z7 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19■□□□□ 0.63
HCFC2Q9Y5Z7 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19■□□□□ 0.63
HCFC2Q9Y5Z7 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19■□□□□ 0.63
HCFC2Q9Y5Z7 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
HCFC2Q9Y5Z7 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19■□□□□ 0.63
HCFC2Q9Y5Z7 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19■□□□□ 0.63
HCFC2Q9Y5Z7 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19■□□□□ 0.63
HCFC2Q9Y5Z7 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
HCFC2Q9Y5Z7 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
HCFC2Q9Y5Z7 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
HCFC2Q9Y5Z7 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HCFC2Q9Y5Z7 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19■□□□□ 0.63
HCFC2Q9Y5Z7 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19■□□□□ 0.63
HCFC2Q9Y5Z7 LINC01126-201ENST00000623515 1646 ntBASIC19■□□□□ 0.63
HCFC2Q9Y5Z7 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19■□□□□ 0.63
HCFC2Q9Y5Z7 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.99■□□□□ 0.63
HCFC2Q9Y5Z7 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HCFC2Q9Y5Z7 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HCFC2Q9Y5Z7 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HCFC2Q9Y5Z7 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms