Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TRAPPC1Q9Y5R8 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TRAPPC1Q9Y5R8 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAPPC1Q9Y5R8 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAPPC1Q9Y5R8 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAPPC1Q9Y5R8 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAPPC1Q9Y5R8 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TRAPPC1Q9Y5R8 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAPPC1Q9Y5R8 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAPPC1Q9Y5R8 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAPPC1Q9Y5R8 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
TRAPPC1Q9Y5R8 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
TRAPPC1Q9Y5R8 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.86□□□□□ -0.19
TRAPPC1Q9Y5R8 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAPPC1Q9Y5R8 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAPPC1Q9Y5R8 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAPPC1Q9Y5R8 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAPPC1Q9Y5R8 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAPPC1Q9Y5R8 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC13.86□□□□□ -0.19
TRAPPC1Q9Y5R8 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAPPC1Q9Y5R8 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAPPC1Q9Y5R8 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAPPC1Q9Y5R8 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAPPC1Q9Y5R8 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAPPC1Q9Y5R8 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAPPC1Q9Y5R8 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAPPC1Q9Y5R8 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAPPC1Q9Y5R8 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAPPC1Q9Y5R8 HEIH-201ENST00000623091 1652 ntBASIC13.85□□□□□ -0.19
TRAPPC1Q9Y5R8 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAPPC1Q9Y5R8 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAPPC1Q9Y5R8 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TRAPPC1Q9Y5R8 CROCCP2-202ENST00000412962 2773 ntBASIC13.85□□□□□ -0.19
TRAPPC1Q9Y5R8 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAPPC1Q9Y5R8 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TRAPPC1Q9Y5R8 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAPPC1Q9Y5R8 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAPPC1Q9Y5R8 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAPPC1Q9Y5R8 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAPPC1Q9Y5R8 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAPPC1Q9Y5R8 AC106886.4-201ENST00000623557 2502 ntBASIC13.85□□□□□ -0.19
TRAPPC1Q9Y5R8 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAPPC1Q9Y5R8 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAPPC1Q9Y5R8 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC13.85□□□□□ -0.19
TRAPPC1Q9Y5R8 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
TRAPPC1Q9Y5R8 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAPPC1Q9Y5R8 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAPPC1Q9Y5R8 HSD17B1P1-201ENST00000590052 955 ntBASIC13.85□□□□□ -0.19
TRAPPC1Q9Y5R8 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
TRAPPC1Q9Y5R8 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAPPC1Q9Y5R8 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAPPC1Q9Y5R8 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAPPC1Q9Y5R8 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAPPC1Q9Y5R8 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAPPC1Q9Y5R8 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAPPC1Q9Y5R8 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAPPC1Q9Y5R8 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAPPC1Q9Y5R8 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TRAPPC1Q9Y5R8 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC13.85□□□□□ -0.19
TRAPPC1Q9Y5R8 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAPPC1Q9Y5R8 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAPPC1Q9Y5R8 MPST-204ENST00000404393 1329 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAPPC1Q9Y5R8 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAPPC1Q9Y5R8 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
TRAPPC1Q9Y5R8 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAPPC1Q9Y5R8 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAPPC1Q9Y5R8 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAPPC1Q9Y5R8 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAPPC1Q9Y5R8 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAPPC1Q9Y5R8 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TRAPPC1Q9Y5R8 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAPPC1Q9Y5R8 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAPPC1Q9Y5R8 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAPPC1Q9Y5R8 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAPPC1Q9Y5R8 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAPPC1Q9Y5R8 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAPPC1Q9Y5R8 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
TRAPPC1Q9Y5R8 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAPPC1Q9Y5R8 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAPPC1Q9Y5R8 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
TRAPPC1Q9Y5R8 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAPPC1Q9Y5R8 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
TRAPPC1Q9Y5R8 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
TRAPPC1Q9Y5R8 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAPPC1Q9Y5R8 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAPPC1Q9Y5R8 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAPPC1Q9Y5R8 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
TRAPPC1Q9Y5R8 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC13.84□□□□□ -0.19
TRAPPC1Q9Y5R8 QDPR-206ENST00000508623 601 ntTSL 3 BASIC13.84□□□□□ -0.19
TRAPPC1Q9Y5R8 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC13.84□□□□□ -0.19
TRAPPC1Q9Y5R8 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAPPC1Q9Y5R8 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TRAPPC1Q9Y5R8 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
TRAPPC1Q9Y5R8 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAPPC1Q9Y5R8 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAPPC1Q9Y5R8 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAPPC1Q9Y5R8 TSPY26P-201ENST00000476365 1326 ntBASIC13.84□□□□□ -0.19
TRAPPC1Q9Y5R8 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAPPC1Q9Y5R8 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAPPC1Q9Y5R8 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms