Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LHX6Q9UPM6 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LHX6Q9UPM6 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.24■□□□□ 0.35
LHX6Q9UPM6 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LHX6Q9UPM6 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LHX6Q9UPM6 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LHX6Q9UPM6 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
LHX6Q9UPM6 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LHX6Q9UPM6 AC023274.1-201ENST00000418278 595 ntBASIC17.24■□□□□ 0.35
LHX6Q9UPM6 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.24■□□□□ 0.35
LHX6Q9UPM6 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.24■□□□□ 0.35
LHX6Q9UPM6 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.24■□□□□ 0.35
LHX6Q9UPM6 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC17.24■□□□□ 0.35
LHX6Q9UPM6 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.24■□□□□ 0.35
LHX6Q9UPM6 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.24■□□□□ 0.35
LHX6Q9UPM6 ADAM3B-201ENST00000569937 840 ntBASIC17.24■□□□□ 0.35
LHX6Q9UPM6 BNIP3P18-201ENST00000593976 575 ntBASIC17.24■□□□□ 0.35
LHX6Q9UPM6 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LHX6Q9UPM6 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LHX6Q9UPM6 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
LHX6Q9UPM6 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LHX6Q9UPM6 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LHX6Q9UPM6 HLA-J-201ENST00000462773 1622 ntBASIC17.24■□□□□ 0.35
LHX6Q9UPM6 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
LHX6Q9UPM6 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
LHX6Q9UPM6 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LHX6Q9UPM6 ZNF815P-204ENST00000434898 1737 ntBASIC17.24■□□□□ 0.35
LHX6Q9UPM6 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LHX6Q9UPM6 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LHX6Q9UPM6 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.24■□□□□ 0.35
LHX6Q9UPM6 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LHX6Q9UPM6 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.23■□□□□ 0.35
LHX6Q9UPM6 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LHX6Q9UPM6 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LHX6Q9UPM6 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LHX6Q9UPM6 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LHX6Q9UPM6 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LHX6Q9UPM6 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.23■□□□□ 0.35
LHX6Q9UPM6 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LHX6Q9UPM6 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LHX6Q9UPM6 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LHX6Q9UPM6 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LHX6Q9UPM6 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LHX6Q9UPM6 AP002472.1-201ENST00000577490 586 ntBASIC17.23■□□□□ 0.35
LHX6Q9UPM6 MTDHP3-201ENST00000594186 672 ntBASIC17.23■□□□□ 0.35
LHX6Q9UPM6 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.23■□□□□ 0.35
LHX6Q9UPM6 AL391001.1-201ENST00000602747 715 ntBASIC17.23■□□□□ 0.35
LHX6Q9UPM6 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.23■□□□□ 0.35
LHX6Q9UPM6 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LHX6Q9UPM6 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.23■□□□□ 0.35
LHX6Q9UPM6 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LHX6Q9UPM6 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.23■□□□□ 0.35
LHX6Q9UPM6 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
LHX6Q9UPM6 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LHX6Q9UPM6 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.23■□□□□ 0.35
LHX6Q9UPM6 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LHX6Q9UPM6 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.23■□□□□ 0.35
LHX6Q9UPM6 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
LHX6Q9UPM6 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.22■□□□□ 0.35
LHX6Q9UPM6 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LHX6Q9UPM6 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
LHX6Q9UPM6 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LHX6Q9UPM6 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.22■□□□□ 0.35
LHX6Q9UPM6 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
LHX6Q9UPM6 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LHX6Q9UPM6 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LHX6Q9UPM6 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LHX6Q9UPM6 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
LHX6Q9UPM6 AL023284.2-201ENST00000405850 579 ntBASIC17.22■□□□□ 0.35
LHX6Q9UPM6 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.22■□□□□ 0.35
LHX6Q9UPM6 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC17.22■□□□□ 0.35
LHX6Q9UPM6 AC005034.1-201ENST00000426657 489 ntBASIC17.22■□□□□ 0.35
LHX6Q9UPM6 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LHX6Q9UPM6 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.22■□□□□ 0.35
LHX6Q9UPM6 COA4-204ENST00000541455 1038 ntTSL 5 BASIC17.22■□□□□ 0.35
LHX6Q9UPM6 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.22■□□□□ 0.35
LHX6Q9UPM6 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.22■□□□□ 0.35
LHX6Q9UPM6 AP001269.4-201ENST00000609611 512 ntBASIC17.22■□□□□ 0.35
LHX6Q9UPM6 AC114341.1-201ENST00000618070 349 ntBASIC17.22■□□□□ 0.35
LHX6Q9UPM6 AL035252.4-201ENST00000624174 288 ntBASIC17.22■□□□□ 0.35
LHX6Q9UPM6 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.22■□□□□ 0.35
LHX6Q9UPM6 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LHX6Q9UPM6 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LHX6Q9UPM6 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.22■□□□□ 0.35
LHX6Q9UPM6 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LHX6Q9UPM6 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LHX6Q9UPM6 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LHX6Q9UPM6 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LHX6Q9UPM6 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LHX6Q9UPM6 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.22■□□□□ 0.35
LHX6Q9UPM6 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LHX6Q9UPM6 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LHX6Q9UPM6 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LHX6Q9UPM6 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.21■□□□□ 0.35
LHX6Q9UPM6 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
LHX6Q9UPM6 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LHX6Q9UPM6 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LHX6Q9UPM6 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.21■□□□□ 0.35
LHX6Q9UPM6 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.21■□□□□ 0.35
LHX6Q9UPM6 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms