Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CALCOCO1Q9P1Z2 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CALCOCO1Q9P1Z2 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CALCOCO1Q9P1Z2 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CALCOCO1Q9P1Z2 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CALCOCO1Q9P1Z2 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CALCOCO1Q9P1Z2 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.92■□□□□ 0.78
CALCOCO1Q9P1Z2 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CALCOCO1Q9P1Z2 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CALCOCO1Q9P1Z2 KRT18P35-201ENST00000510488 1269 ntBASIC19.92■□□□□ 0.78
CALCOCO1Q9P1Z2 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CALCOCO1Q9P1Z2 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.92■□□□□ 0.78
CALCOCO1Q9P1Z2 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.92■□□□□ 0.78
CALCOCO1Q9P1Z2 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CALCOCO1Q9P1Z2 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.92■□□□□ 0.78
CALCOCO1Q9P1Z2 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CALCOCO1Q9P1Z2 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.92■□□□□ 0.78
CALCOCO1Q9P1Z2 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CALCOCO1Q9P1Z2 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CALCOCO1Q9P1Z2 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CALCOCO1Q9P1Z2 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CALCOCO1Q9P1Z2 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CALCOCO1Q9P1Z2 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CALCOCO1Q9P1Z2 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CALCOCO1Q9P1Z2 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CALCOCO1Q9P1Z2 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
CALCOCO1Q9P1Z2 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.91■□□□□ 0.78
CALCOCO1Q9P1Z2 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CALCOCO1Q9P1Z2 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.91■□□□□ 0.78
CALCOCO1Q9P1Z2 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CALCOCO1Q9P1Z2 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.91■□□□□ 0.78
CALCOCO1Q9P1Z2 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CALCOCO1Q9P1Z2 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC19.91■□□□□ 0.78
CALCOCO1Q9P1Z2 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CALCOCO1Q9P1Z2 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.91■□□□□ 0.78
CALCOCO1Q9P1Z2 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
CALCOCO1Q9P1Z2 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CALCOCO1Q9P1Z2 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.91■□□□□ 0.78
CALCOCO1Q9P1Z2 AC005521.1-201ENST00000393351 872 ntBASIC19.91■□□□□ 0.78
CALCOCO1Q9P1Z2 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.91■□□□□ 0.78
CALCOCO1Q9P1Z2 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.91■□□□□ 0.78
CALCOCO1Q9P1Z2 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.91■□□□□ 0.78
CALCOCO1Q9P1Z2 FITM1-202ENST00000559294 800 ntBASIC19.91■□□□□ 0.78
CALCOCO1Q9P1Z2 NAPSB-206ENST00000562112 1266 ntBASIC19.91■□□□□ 0.78
CALCOCO1Q9P1Z2 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.91■□□□□ 0.78
CALCOCO1Q9P1Z2 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.91■□□□□ 0.78
CALCOCO1Q9P1Z2 AP000692.2-201ENST00000608391 879 ntBASIC19.91■□□□□ 0.78
CALCOCO1Q9P1Z2 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CALCOCO1Q9P1Z2 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CALCOCO1Q9P1Z2 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.91■□□□□ 0.78
CALCOCO1Q9P1Z2 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CALCOCO1Q9P1Z2 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.91■□□□□ 0.78
CALCOCO1Q9P1Z2 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.91■□□□□ 0.78
CALCOCO1Q9P1Z2 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CALCOCO1Q9P1Z2 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CALCOCO1Q9P1Z2 CYP2D8P-201ENST00000433633 1490 ntBASIC19.91■□□□□ 0.78
CALCOCO1Q9P1Z2 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CALCOCO1Q9P1Z2 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CALCOCO1Q9P1Z2 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CALCOCO1Q9P1Z2 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CALCOCO1Q9P1Z2 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CALCOCO1Q9P1Z2 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.9■□□□□ 0.78
CALCOCO1Q9P1Z2 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.9■□□□□ 0.78
CALCOCO1Q9P1Z2 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CALCOCO1Q9P1Z2 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.9■□□□□ 0.78
CALCOCO1Q9P1Z2 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CALCOCO1Q9P1Z2 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CALCOCO1Q9P1Z2 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.9■□□□□ 0.78
CALCOCO1Q9P1Z2 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CALCOCO1Q9P1Z2 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CALCOCO1Q9P1Z2 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CALCOCO1Q9P1Z2 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CALCOCO1Q9P1Z2 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CALCOCO1Q9P1Z2 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.9■□□□□ 0.78
CALCOCO1Q9P1Z2 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CALCOCO1Q9P1Z2 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CALCOCO1Q9P1Z2 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.9■□□□□ 0.78
CALCOCO1Q9P1Z2 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.9■□□□□ 0.78
CALCOCO1Q9P1Z2 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CALCOCO1Q9P1Z2 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CALCOCO1Q9P1Z2 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.9■□□□□ 0.78
CALCOCO1Q9P1Z2 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
CALCOCO1Q9P1Z2 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CALCOCO1Q9P1Z2 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
CALCOCO1Q9P1Z2 AL162727.3-201ENST00000635661 2787 ntBASIC19.89■□□□□ 0.78
CALCOCO1Q9P1Z2 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
CALCOCO1Q9P1Z2 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CALCOCO1Q9P1Z2 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CALCOCO1Q9P1Z2 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CALCOCO1Q9P1Z2 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CALCOCO1Q9P1Z2 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CALCOCO1Q9P1Z2 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CALCOCO1Q9P1Z2 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CALCOCO1Q9P1Z2 AC113347.1-201ENST00000413321 391 ntBASIC19.89■□□□□ 0.77
CALCOCO1Q9P1Z2 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.89■□□□□ 0.77
CALCOCO1Q9P1Z2 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CALCOCO1Q9P1Z2 FAM207BP-201ENST00000447172 505 ntBASIC19.89■□□□□ 0.77
CALCOCO1Q9P1Z2 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.89■□□□□ 0.77
CALCOCO1Q9P1Z2 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.89■□□□□ 0.77
CALCOCO1Q9P1Z2 AL049597.2-201ENST00000565575 961 ntBASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms