Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COMMD9Q9P000 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COMMD9Q9P000 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COMMD9Q9P000 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.58■□□□□ 0.08
COMMD9Q9P000 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
COMMD9Q9P000 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COMMD9Q9P000 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
COMMD9Q9P000 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
COMMD9Q9P000 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
COMMD9Q9P000 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COMMD9Q9P000 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
COMMD9Q9P000 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
COMMD9Q9P000 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COMMD9Q9P000 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COMMD9Q9P000 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COMMD9Q9P000 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.57■□□□□ 0.08
COMMD9Q9P000 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COMMD9Q9P000 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.57■□□□□ 0.08
COMMD9Q9P000 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.57■□□□□ 0.08
COMMD9Q9P000 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.57■□□□□ 0.08
COMMD9Q9P000 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC15.57■□□□□ 0.08
COMMD9Q9P000 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COMMD9Q9P000 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COMMD9Q9P000 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC15.57■□□□□ 0.08
COMMD9Q9P000 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COMMD9Q9P000 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
COMMD9Q9P000 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC15.57■□□□□ 0.08
COMMD9Q9P000 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC15.57■□□□□ 0.08
COMMD9Q9P000 AL121829.2-201ENST00000620908 328 ntBASIC15.57■□□□□ 0.08
COMMD9Q9P000 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COMMD9Q9P000 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COMMD9Q9P000 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COMMD9Q9P000 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COMMD9Q9P000 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COMMD9Q9P000 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COMMD9Q9P000 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
COMMD9Q9P000 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
COMMD9Q9P000 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
COMMD9Q9P000 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.57■□□□□ 0.08
COMMD9Q9P000 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.57■□□□□ 0.08
COMMD9Q9P000 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COMMD9Q9P000 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
COMMD9Q9P000 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
COMMD9Q9P000 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
COMMD9Q9P000 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
COMMD9Q9P000 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COMMD9Q9P000 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COMMD9Q9P000 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COMMD9Q9P000 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
COMMD9Q9P000 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD9Q9P000 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
COMMD9Q9P000 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD9Q9P000 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD9Q9P000 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.56■□□□□ 0.08
COMMD9Q9P000 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
COMMD9Q9P000 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD9Q9P000 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD9Q9P000 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD9Q9P000 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
COMMD9Q9P000 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.56■□□□□ 0.08
COMMD9Q9P000 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
COMMD9Q9P000 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD9Q9P000 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD9Q9P000 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD9Q9P000 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD9Q9P000 PPP1R14BP2-201ENST00000426284 444 ntBASIC15.56■□□□□ 0.08
COMMD9Q9P000 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
COMMD9Q9P000 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC15.56■□□□□ 0.08
COMMD9Q9P000 GATS-209ENST00000454084 1030 ntTSL 3 BASIC15.56■□□□□ 0.08
COMMD9Q9P000 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC15.56■□□□□ 0.08
COMMD9Q9P000 OR2A1-AS1-207ENST00000486094 819 ntBASIC15.56■□□□□ 0.08
COMMD9Q9P000 PNMA6B-201ENST00000538162 1200 ntBASIC15.56■□□□□ 0.08
COMMD9Q9P000 PNN-205ENST00000556530 601 ntTSL 2 BASIC15.56■□□□□ 0.08
COMMD9Q9P000 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC15.56■□□□□ 0.08
COMMD9Q9P000 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD9Q9P000 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC15.56■□□□□ 0.08
COMMD9Q9P000 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC15.56■□□□□ 0.08
COMMD9Q9P000 MYC-209ENST00000641252 345 ntBASIC15.56■□□□□ 0.08
COMMD9Q9P000 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC15.56■□□□□ 0.08
COMMD9Q9P000 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD9Q9P000 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
COMMD9Q9P000 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC15.56■□□□□ 0.08
COMMD9Q9P000 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD9Q9P000 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC15.56■□□□□ 0.08
COMMD9Q9P000 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD9Q9P000 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.56■□□□□ 0.08
COMMD9Q9P000 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD9Q9P000 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.56■□□□□ 0.08
COMMD9Q9P000 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD9Q9P000 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD9Q9P000 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC15.56■□□□□ 0.08
COMMD9Q9P000 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.56■□□□□ 0.08
COMMD9Q9P000 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
COMMD9Q9P000 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
COMMD9Q9P000 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD9Q9P000 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
COMMD9Q9P000 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
COMMD9Q9P000 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD9Q9P000 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD9Q9P000 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms