Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.65■□□□□ 0.74
NXF3Q9H4D5 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NXF3Q9H4D5 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.65■□□□□ 0.74
NXF3Q9H4D5 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NXF3Q9H4D5 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.65■□□□□ 0.74
NXF3Q9H4D5 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NXF3Q9H4D5 AC018445.3-201ENST00000624177 1945 ntBASIC19.65■□□□□ 0.74
NXF3Q9H4D5 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
NXF3Q9H4D5 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
NXF3Q9H4D5 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NXF3Q9H4D5 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NXF3Q9H4D5 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NXF3Q9H4D5 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.65■□□□□ 0.74
NXF3Q9H4D5 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NXF3Q9H4D5 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.65■□□□□ 0.74
NXF3Q9H4D5 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.65■□□□□ 0.74
NXF3Q9H4D5 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.65■□□□□ 0.74
NXF3Q9H4D5 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.65■□□□□ 0.74
NXF3Q9H4D5 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NXF3Q9H4D5 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
NXF3Q9H4D5 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NXF3Q9H4D5 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.65■□□□□ 0.74
NXF3Q9H4D5 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NXF3Q9H4D5 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.65■□□□□ 0.74
NXF3Q9H4D5 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
NXF3Q9H4D5 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NXF3Q9H4D5 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.64■□□□□ 0.74
NXF3Q9H4D5 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
NXF3Q9H4D5 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
NXF3Q9H4D5 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NXF3Q9H4D5 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.64■□□□□ 0.73
NXF3Q9H4D5 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
NXF3Q9H4D5 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.64■□□□□ 0.73
NXF3Q9H4D5 FAAHP1-202ENST00000446499 1238 ntBASIC19.64■□□□□ 0.73
NXF3Q9H4D5 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NXF3Q9H4D5 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.64■□□□□ 0.73
NXF3Q9H4D5 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.64■□□□□ 0.73
NXF3Q9H4D5 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.64■□□□□ 0.73
NXF3Q9H4D5 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NXF3Q9H4D5 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NXF3Q9H4D5 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.64■□□□□ 0.73
NXF3Q9H4D5 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NXF3Q9H4D5 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
NXF3Q9H4D5 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.64■□□□□ 0.73
NXF3Q9H4D5 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
NXF3Q9H4D5 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.64■□□□□ 0.73
NXF3Q9H4D5 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
NXF3Q9H4D5 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NXF3Q9H4D5 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
NXF3Q9H4D5 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NXF3Q9H4D5 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NXF3Q9H4D5 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
NXF3Q9H4D5 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NXF3Q9H4D5 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NXF3Q9H4D5 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NXF3Q9H4D5 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NXF3Q9H4D5 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NXF3Q9H4D5 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NXF3Q9H4D5 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NXF3Q9H4D5 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.63■□□□□ 0.73
NXF3Q9H4D5 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NXF3Q9H4D5 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NXF3Q9H4D5 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NXF3Q9H4D5 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
NXF3Q9H4D5 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NXF3Q9H4D5 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.63■□□□□ 0.73
NXF3Q9H4D5 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NXF3Q9H4D5 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
NXF3Q9H4D5 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NXF3Q9H4D5 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.63■□□□□ 0.73
NXF3Q9H4D5 MTCL1P1-201ENST00000446207 792 ntBASIC19.63■□□□□ 0.73
NXF3Q9H4D5 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.63■□□□□ 0.73
NXF3Q9H4D5 AC096582.2-201ENST00000510860 516 ntBASIC19.63■□□□□ 0.73
NXF3Q9H4D5 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.63■□□□□ 0.73
NXF3Q9H4D5 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.63■□□□□ 0.73
NXF3Q9H4D5 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NXF3Q9H4D5 AL031008.1-201ENST00000619963 541 ntBASIC19.63■□□□□ 0.73
NXF3Q9H4D5 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
NXF3Q9H4D5 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NXF3Q9H4D5 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
NXF3Q9H4D5 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
NXF3Q9H4D5 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NXF3Q9H4D5 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
NXF3Q9H4D5 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NXF3Q9H4D5 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NXF3Q9H4D5 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
NXF3Q9H4D5 AC073592.3-201ENST00000625118 1834 ntBASIC19.62■□□□□ 0.73
NXF3Q9H4D5 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NXF3Q9H4D5 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NXF3Q9H4D5 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
NXF3Q9H4D5 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NXF3Q9H4D5 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NXF3Q9H4D5 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NXF3Q9H4D5 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NXF3Q9H4D5 AC093503.3-201ENST00000624917 2352 ntBASIC19.62■□□□□ 0.73
NXF3Q9H4D5 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NXF3Q9H4D5 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
NXF3Q9H4D5 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NXF3Q9H4D5 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NXF3Q9H4D5 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms