Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.89■□□□□ 0.3
POLR2J3Q9H1A7 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
POLR2J3Q9H1A7 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
POLR2J3Q9H1A7 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.3
POLR2J3Q9H1A7 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
POLR2J3Q9H1A7 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
POLR2J3Q9H1A7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.89■□□□□ 0.29
POLR2J3Q9H1A7 HOXB1-202ENST00000577092 1414 ntBASIC16.89■□□□□ 0.29
POLR2J3Q9H1A7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
POLR2J3Q9H1A7 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
POLR2J3Q9H1A7 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.89■□□□□ 0.29
POLR2J3Q9H1A7 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
POLR2J3Q9H1A7 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
POLR2J3Q9H1A7 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.89■□□□□ 0.29
POLR2J3Q9H1A7 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.89■□□□□ 0.29
POLR2J3Q9H1A7 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.89■□□□□ 0.29
POLR2J3Q9H1A7 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
POLR2J3Q9H1A7 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
POLR2J3Q9H1A7 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
POLR2J3Q9H1A7 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.89■□□□□ 0.29
POLR2J3Q9H1A7 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.89■□□□□ 0.29
POLR2J3Q9H1A7 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.89■□□□□ 0.29
POLR2J3Q9H1A7 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
POLR2J3Q9H1A7 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.89■□□□□ 0.29
POLR2J3Q9H1A7 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.89■□□□□ 0.29
POLR2J3Q9H1A7 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
POLR2J3Q9H1A7 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.89■□□□□ 0.29
POLR2J3Q9H1A7 AC233702.5-201ENST00000584107 538 ntBASIC16.89■□□□□ 0.29
POLR2J3Q9H1A7 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.89■□□□□ 0.29
POLR2J3Q9H1A7 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.89■□□□□ 0.29
POLR2J3Q9H1A7 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.89■□□□□ 0.29
POLR2J3Q9H1A7 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.89■□□□□ 0.29
POLR2J3Q9H1A7 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.89■□□□□ 0.29
POLR2J3Q9H1A7 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
POLR2J3Q9H1A7 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
POLR2J3Q9H1A7 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
POLR2J3Q9H1A7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
POLR2J3Q9H1A7 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.89■□□□□ 0.29
POLR2J3Q9H1A7 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
POLR2J3Q9H1A7 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
POLR2J3Q9H1A7 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
POLR2J3Q9H1A7 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
POLR2J3Q9H1A7 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.88■□□□□ 0.29
POLR2J3Q9H1A7 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
POLR2J3Q9H1A7 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
POLR2J3Q9H1A7 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
POLR2J3Q9H1A7 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
POLR2J3Q9H1A7 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.88■□□□□ 0.29
POLR2J3Q9H1A7 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.88■□□□□ 0.29
POLR2J3Q9H1A7 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.88■□□□□ 0.29
POLR2J3Q9H1A7 AC142381.4-202ENST00000563973 229 ntBASIC16.88■□□□□ 0.29
POLR2J3Q9H1A7 AC009065.1-201ENST00000564055 1225 ntBASIC16.88■□□□□ 0.29
POLR2J3Q9H1A7 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
POLR2J3Q9H1A7 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
POLR2J3Q9H1A7 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
POLR2J3Q9H1A7 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
POLR2J3Q9H1A7 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
POLR2J3Q9H1A7 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
POLR2J3Q9H1A7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.88■□□□□ 0.29
POLR2J3Q9H1A7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
POLR2J3Q9H1A7 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.87■□□□□ 0.29
POLR2J3Q9H1A7 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
POLR2J3Q9H1A7 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
POLR2J3Q9H1A7 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
POLR2J3Q9H1A7 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
POLR2J3Q9H1A7 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
POLR2J3Q9H1A7 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
POLR2J3Q9H1A7 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
POLR2J3Q9H1A7 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
POLR2J3Q9H1A7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
POLR2J3Q9H1A7 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
POLR2J3Q9H1A7 MIR149-201ENST00000384879 89 ntBASIC16.87■□□□□ 0.29
POLR2J3Q9H1A7 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
POLR2J3Q9H1A7 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.87■□□□□ 0.29
POLR2J3Q9H1A7 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.87■□□□□ 0.29
POLR2J3Q9H1A7 AC113410.3-201ENST00000623366 203 ntBASIC16.87■□□□□ 0.29
POLR2J3Q9H1A7 AL049637.2-201ENST00000641778 930 ntBASIC16.87■□□□□ 0.29
POLR2J3Q9H1A7 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
POLR2J3Q9H1A7 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
POLR2J3Q9H1A7 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
POLR2J3Q9H1A7 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
POLR2J3Q9H1A7 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.87■□□□□ 0.29
POLR2J3Q9H1A7 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
POLR2J3Q9H1A7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
POLR2J3Q9H1A7 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.87■□□□□ 0.29
POLR2J3Q9H1A7 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
POLR2J3Q9H1A7 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
POLR2J3Q9H1A7 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.87■□□□□ 0.29
POLR2J3Q9H1A7 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
POLR2J3Q9H1A7 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
POLR2J3Q9H1A7 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
POLR2J3Q9H1A7 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
POLR2J3Q9H1A7 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
POLR2J3Q9H1A7 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
POLR2J3Q9H1A7 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.86■□□□□ 0.29
POLR2J3Q9H1A7 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
POLR2J3Q9H1A7 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
POLR2J3Q9H1A7 AC036111.1-201ENST00000533973 1582 ntBASIC16.86■□□□□ 0.29
POLR2J3Q9H1A7 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
POLR2J3Q9H1A7 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms