Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF38Q9H0F5 AC004870.1-201ENST00000315132 882 ntBASIC18.87■□□□□ 0.61
RNF38Q9H0F5 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF38Q9H0F5 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
RNF38Q9H0F5 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF38Q9H0F5 VENTXP7-201ENST00000475503 772 ntBASIC18.87■□□□□ 0.61
RNF38Q9H0F5 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF38Q9H0F5 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.87■□□□□ 0.61
RNF38Q9H0F5 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RNF38Q9H0F5 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF38Q9H0F5 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF38Q9H0F5 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.87■□□□□ 0.61
RNF38Q9H0F5 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF38Q9H0F5 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF38Q9H0F5 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
RNF38Q9H0F5 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF38Q9H0F5 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF38Q9H0F5 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF38Q9H0F5 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF38Q9H0F5 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF38Q9H0F5 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF38Q9H0F5 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.86■□□□□ 0.61
RNF38Q9H0F5 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF38Q9H0F5 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.86■□□□□ 0.61
RNF38Q9H0F5 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF38Q9H0F5 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF38Q9H0F5 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF38Q9H0F5 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF38Q9H0F5 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
RNF38Q9H0F5 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF38Q9H0F5 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF38Q9H0F5 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF38Q9H0F5 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.86■□□□□ 0.61
RNF38Q9H0F5 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.86■□□□□ 0.61
RNF38Q9H0F5 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.86■□□□□ 0.61
RNF38Q9H0F5 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.86■□□□□ 0.61
RNF38Q9H0F5 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.86■□□□□ 0.61
RNF38Q9H0F5 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF38Q9H0F5 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.86■□□□□ 0.61
RNF38Q9H0F5 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.86■□□□□ 0.61
RNF38Q9H0F5 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF38Q9H0F5 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF38Q9H0F5 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF38Q9H0F5 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
RNF38Q9H0F5 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF38Q9H0F5 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
RNF38Q9H0F5 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF38Q9H0F5 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.85■□□□□ 0.61
RNF38Q9H0F5 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
RNF38Q9H0F5 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF38Q9H0F5 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF38Q9H0F5 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF38Q9H0F5 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF38Q9H0F5 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RNF38Q9H0F5 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF38Q9H0F5 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF38Q9H0F5 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF38Q9H0F5 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.85■□□□□ 0.61
RNF38Q9H0F5 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF38Q9H0F5 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF38Q9H0F5 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF38Q9H0F5 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RNF38Q9H0F5 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF38Q9H0F5 MINOS1P3-201ENST00000457048 203 ntBASIC18.85■□□□□ 0.61
RNF38Q9H0F5 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF38Q9H0F5 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.85■□□□□ 0.61
RNF38Q9H0F5 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF38Q9H0F5 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
RNF38Q9H0F5 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF38Q9H0F5 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF38Q9H0F5 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
RNF38Q9H0F5 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF38Q9H0F5 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.85■□□□□ 0.61
RNF38Q9H0F5 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
RNF38Q9H0F5 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF38Q9H0F5 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF38Q9H0F5 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF38Q9H0F5 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF38Q9H0F5 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.84■□□□□ 0.61
RNF38Q9H0F5 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF38Q9H0F5 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF38Q9H0F5 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.84■□□□□ 0.61
RNF38Q9H0F5 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF38Q9H0F5 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF38Q9H0F5 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF38Q9H0F5 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RNF38Q9H0F5 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF38Q9H0F5 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF38Q9H0F5 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
RNF38Q9H0F5 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
RNF38Q9H0F5 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF38Q9H0F5 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.84■□□□□ 0.61
RNF38Q9H0F5 FAAHP1-202ENST00000446499 1238 ntBASIC18.84■□□□□ 0.61
RNF38Q9H0F5 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.84■□□□□ 0.61
RNF38Q9H0F5 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF38Q9H0F5 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.84■□□□□ 0.61
RNF38Q9H0F5 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF38Q9H0F5 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
RNF38Q9H0F5 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF38Q9H0F5 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms