Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.86■□□□□ 0.61
FOXP3Q9BZS1 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXP3Q9BZS1 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
FOXP3Q9BZS1 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXP3Q9BZS1 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXP3Q9BZS1 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
FOXP3Q9BZS1 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.86■□□□□ 0.61
FOXP3Q9BZS1 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
FOXP3Q9BZS1 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.86■□□□□ 0.61
FOXP3Q9BZS1 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
FOXP3Q9BZS1 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
FOXP3Q9BZS1 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
FOXP3Q9BZS1 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
FOXP3Q9BZS1 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXP3Q9BZS1 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXP3Q9BZS1 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXP3Q9BZS1 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXP3Q9BZS1 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.85■□□□□ 0.61
FOXP3Q9BZS1 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.85■□□□□ 0.61
FOXP3Q9BZS1 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
FOXP3Q9BZS1 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.85■□□□□ 0.61
FOXP3Q9BZS1 MIR564-202ENST00000385049 94 ntBASIC18.85■□□□□ 0.61
FOXP3Q9BZS1 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
FOXP3Q9BZS1 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
FOXP3Q9BZS1 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
FOXP3Q9BZS1 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.85■□□□□ 0.61
FOXP3Q9BZS1 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.85■□□□□ 0.61
FOXP3Q9BZS1 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXP3Q9BZS1 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXP3Q9BZS1 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.85■□□□□ 0.61
FOXP3Q9BZS1 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
FOXP3Q9BZS1 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
FOXP3Q9BZS1 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.85■□□□□ 0.61
FOXP3Q9BZS1 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXP3Q9BZS1 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
FOXP3Q9BZS1 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXP3Q9BZS1 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXP3Q9BZS1 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXP3Q9BZS1 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.84■□□□□ 0.61
FOXP3Q9BZS1 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXP3Q9BZS1 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
FOXP3Q9BZS1 AC073508.3-201ENST00000619697 1419 ntBASIC18.84■□□□□ 0.61
FOXP3Q9BZS1 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
FOXP3Q9BZS1 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
FOXP3Q9BZS1 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXP3Q9BZS1 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
FOXP3Q9BZS1 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.84■□□□□ 0.61
FOXP3Q9BZS1 CRYGFP-201ENST00000418459 633 ntBASIC18.84■□□□□ 0.61
FOXP3Q9BZS1 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.84■□□□□ 0.61
FOXP3Q9BZS1 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.84■□□□□ 0.61
FOXP3Q9BZS1 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.84■□□□□ 0.61
FOXP3Q9BZS1 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.84■□□□□ 0.61
FOXP3Q9BZS1 AC010203.1-204ENST00000548782 407 ntBASIC18.84■□□□□ 0.61
FOXP3Q9BZS1 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.84■□□□□ 0.61
FOXP3Q9BZS1 C2orf69P3-201ENST00000565542 1120 ntBASIC18.84■□□□□ 0.61
FOXP3Q9BZS1 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
FOXP3Q9BZS1 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.84■□□□□ 0.61
FOXP3Q9BZS1 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXP3Q9BZS1 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXP3Q9BZS1 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXP3Q9BZS1 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
FOXP3Q9BZS1 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.84■□□□□ 0.61
FOXP3Q9BZS1 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXP3Q9BZS1 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
FOXP3Q9BZS1 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.84■□□□□ 0.61
FOXP3Q9BZS1 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXP3Q9BZS1 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXP3Q9BZS1 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXP3Q9BZS1 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
FOXP3Q9BZS1 PRORSD1P-202ENST00000563365 2154 ntBASIC18.83■□□□□ 0.61
FOXP3Q9BZS1 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
FOXP3Q9BZS1 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
FOXP3Q9BZS1 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
FOXP3Q9BZS1 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
FOXP3Q9BZS1 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
FOXP3Q9BZS1 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
FOXP3Q9BZS1 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
FOXP3Q9BZS1 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
FOXP3Q9BZS1 AL096828.2-201ENST00000567259 1965 ntBASIC18.83■□□□□ 0.61
FOXP3Q9BZS1 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
FOXP3Q9BZS1 ECEL1P2-202ENST00000465689 757 ntBASIC18.83■□□□□ 0.6
FOXP3Q9BZS1 AC097488.1-201ENST00000507834 756 ntBASIC18.83■□□□□ 0.6
FOXP3Q9BZS1 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.83■□□□□ 0.6
FOXP3Q9BZS1 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
FOXP3Q9BZS1 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
FOXP3Q9BZS1 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
FOXP3Q9BZS1 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
FOXP3Q9BZS1 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
FOXP3Q9BZS1 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
FOXP3Q9BZS1 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.83■□□□□ 0.6
FOXP3Q9BZS1 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
FOXP3Q9BZS1 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXP3Q9BZS1 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXP3Q9BZS1 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXP3Q9BZS1 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
FOXP3Q9BZS1 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.82■□□□□ 0.6
FOXP3Q9BZS1 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXP3Q9BZS1 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
FOXP3Q9BZS1 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXP3Q9BZS1 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms