Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC24.16■■□□□ 1.46
ABCA3Q99758 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
ABCA3Q99758 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
ABCA3Q99758 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC24.16■■□□□ 1.46
ABCA3Q99758 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC24.16■■□□□ 1.46
ABCA3Q99758 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC24.16■■□□□ 1.46
ABCA3Q99758 AC106028.4-201ENST00000614509 607 ntBASIC24.16■■□□□ 1.46
ABCA3Q99758 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
ABCA3Q99758 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
ABCA3Q99758 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
ABCA3Q99758 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
ABCA3Q99758 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
ABCA3Q99758 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
ABCA3Q99758 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC24.16■■□□□ 1.46
ABCA3Q99758 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
ABCA3Q99758 AL137060.1-201ENST00000618151 2648 ntBASIC24.16■■□□□ 1.46
ABCA3Q99758 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
ABCA3Q99758 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
ABCA3Q99758 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
ABCA3Q99758 MYLKP1-201ENST00000509077 1580 ntBASIC24.16■■□□□ 1.46
ABCA3Q99758 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
ABCA3Q99758 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
ABCA3Q99758 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC24.15■■□□□ 1.46
ABCA3Q99758 IGLL3P-201ENST00000412472 434 ntBASIC24.15■■□□□ 1.46
ABCA3Q99758 ADH5P3-201ENST00000433842 1137 ntBASIC24.15■■□□□ 1.46
ABCA3Q99758 MIR4751-201ENST00000578027 74 ntBASIC24.15■■□□□ 1.46
ABCA3Q99758 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC24.15■■□□□ 1.46
ABCA3Q99758 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
ABCA3Q99758 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
ABCA3Q99758 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC24.15■■□□□ 1.46
ABCA3Q99758 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC24.15■■□□□ 1.46
ABCA3Q99758 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC24.15■■□□□ 1.46
ABCA3Q99758 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
ABCA3Q99758 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC24.15■■□□□ 1.46
ABCA3Q99758 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC24.15■■□□□ 1.46
ABCA3Q99758 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
ABCA3Q99758 KLK8-202ENST00000320838 456 ntTSL 5 BASIC24.15■■□□□ 1.46
ABCA3Q99758 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC24.15■■□□□ 1.46
ABCA3Q99758 KLF4P1-201ENST00000412782 1185 ntBASIC24.15■■□□□ 1.46
ABCA3Q99758 SPDYE21P-201ENST00000413323 827 ntBASIC24.15■■□□□ 1.46
ABCA3Q99758 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
ABCA3Q99758 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
ABCA3Q99758 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
ABCA3Q99758 NCF1C-201ENST00000438382 1427 ntBASIC24.15■■□□□ 1.46
ABCA3Q99758 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
ABCA3Q99758 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC24.14■■□□□ 1.46
ABCA3Q99758 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
ABCA3Q99758 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC24.14■■□□□ 1.46
ABCA3Q99758 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
ABCA3Q99758 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
ABCA3Q99758 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.46
ABCA3Q99758 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.46
ABCA3Q99758 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
ABCA3Q99758 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC24.14■■□□□ 1.46
ABCA3Q99758 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
ABCA3Q99758 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC24.14■■□□□ 1.45
ABCA3Q99758 AP002472.1-201ENST00000577490 586 ntBASIC24.14■■□□□ 1.45
ABCA3Q99758 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC24.14■■□□□ 1.45
ABCA3Q99758 AC005593.1-201ENST00000624894 515 ntBASIC24.14■■□□□ 1.45
ABCA3Q99758 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
ABCA3Q99758 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
ABCA3Q99758 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
ABCA3Q99758 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
ABCA3Q99758 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC24.14■■□□□ 1.45
ABCA3Q99758 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
ABCA3Q99758 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
ABCA3Q99758 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
ABCA3Q99758 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
ABCA3Q99758 PDPK2P-202ENST00000562415 1191 ntBASIC24.13■■□□□ 1.45
ABCA3Q99758 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC24.13■■□□□ 1.45
ABCA3Q99758 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
ABCA3Q99758 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
ABCA3Q99758 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC24.13■■□□□ 1.45
ABCA3Q99758 AC093028.1-201ENST00000622998 982 ntBASIC24.13■■□□□ 1.45
ABCA3Q99758 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC24.13■■□□□ 1.45
ABCA3Q99758 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
ABCA3Q99758 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
ABCA3Q99758 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC24.13■■□□□ 1.45
ABCA3Q99758 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
ABCA3Q99758 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC24.13■■□□□ 1.45
ABCA3Q99758 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
ABCA3Q99758 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
ABCA3Q99758 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC24.13■■□□□ 1.45
ABCA3Q99758 CRYGEP-201ENST00000412192 528 ntBASIC24.13■■□□□ 1.45
ABCA3Q99758 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
ABCA3Q99758 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC24.13■■□□□ 1.45
ABCA3Q99758 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC24.13■■□□□ 1.45
ABCA3Q99758 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
ABCA3Q99758 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC24.13■■□□□ 1.45
ABCA3Q99758 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC24.13■■□□□ 1.45
ABCA3Q99758 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
ABCA3Q99758 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC24.12■■□□□ 1.45
ABCA3Q99758 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
ABCA3Q99758 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
ABCA3Q99758 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
ABCA3Q99758 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
ABCA3Q99758 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
ABCA3Q99758 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC24.12■■□□□ 1.45
ABCA3Q99758 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
ABCA3Q99758 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms