Protein–RNA interactions for Protein: Q96PU9

ODF3, Outer dense fiber protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3Q96PU9 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
ODF3Q96PU9 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ODF3Q96PU9 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ODF3Q96PU9 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ODF3Q96PU9 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ODF3Q96PU9 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ODF3Q96PU9 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ODF3Q96PU9 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
ODF3Q96PU9 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC13.49□□□□□ -0.25
ODF3Q96PU9 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC13.49□□□□□ -0.25
ODF3Q96PU9 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ODF3Q96PU9 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ODF3Q96PU9 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ODF3Q96PU9 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ODF3Q96PU9 AL024508.2-201ENST00000607749 1894 ntBASIC13.48□□□□□ -0.25
ODF3Q96PU9 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC13.48□□□□□ -0.25
ODF3Q96PU9 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC13.48□□□□□ -0.25
ODF3Q96PU9 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ODF3Q96PU9 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ODF3Q96PU9 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ODF3Q96PU9 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
ODF3Q96PU9 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ODF3Q96PU9 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ODF3Q96PU9 STK4-201ENST00000372801 2038 ntTSL 2 BASIC13.48□□□□□ -0.25
ODF3Q96PU9 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
ODF3Q96PU9 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
ODF3Q96PU9 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ODF3Q96PU9 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC13.48□□□□□ -0.25
ODF3Q96PU9 HMGA1P5-201ENST00000412453 271 ntBASIC13.48□□□□□ -0.25
ODF3Q96PU9 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
ODF3Q96PU9 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC13.48□□□□□ -0.25
ODF3Q96PU9 DUTP2-201ENST00000519164 463 ntBASIC13.48□□□□□ -0.25
ODF3Q96PU9 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC13.48□□□□□ -0.25
ODF3Q96PU9 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC13.48□□□□□ -0.25
ODF3Q96PU9 MIR4497-201ENST00000583208 89 ntBASIC13.48□□□□□ -0.25
ODF3Q96PU9 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ODF3Q96PU9 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ODF3Q96PU9 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ODF3Q96PU9 AC092865.7-201ENST00000641832 219 ntBASIC13.48□□□□□ -0.25
ODF3Q96PU9 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ODF3Q96PU9 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ODF3Q96PU9 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
ODF3Q96PU9 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC13.48□□□□□ -0.25
ODF3Q96PU9 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
ODF3Q96PU9 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC13.48□□□□□ -0.25
ODF3Q96PU9 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ODF3Q96PU9 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ODF3Q96PU9 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ODF3Q96PU9 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ODF3Q96PU9 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC13.48□□□□□ -0.25
ODF3Q96PU9 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
ODF3Q96PU9 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
ODF3Q96PU9 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ODF3Q96PU9 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC13.48□□□□□ -0.25
ODF3Q96PU9 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC13.48□□□□□ -0.25
ODF3Q96PU9 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
ODF3Q96PU9 CD276-201ENST00000318424 2738 ntTSL 5 BASIC13.48□□□□□ -0.25
ODF3Q96PU9 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ODF3Q96PU9 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ODF3Q96PU9 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ODF3Q96PU9 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ODF3Q96PU9 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ODF3Q96PU9 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
ODF3Q96PU9 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ODF3Q96PU9 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ODF3Q96PU9 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ODF3Q96PU9 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ODF3Q96PU9 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ODF3Q96PU9 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
ODF3Q96PU9 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC13.47□□□□□ -0.25
ODF3Q96PU9 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
ODF3Q96PU9 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC13.47□□□□□ -0.25
ODF3Q96PU9 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ODF3Q96PU9 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ODF3Q96PU9 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
ODF3Q96PU9 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
ODF3Q96PU9 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC13.47□□□□□ -0.25
ODF3Q96PU9 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
ODF3Q96PU9 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ODF3Q96PU9 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ODF3Q96PU9 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC13.47□□□□□ -0.25
ODF3Q96PU9 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
ODF3Q96PU9 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ODF3Q96PU9 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ODF3Q96PU9 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC13.47□□□□□ -0.25
ODF3Q96PU9 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC13.47□□□□□ -0.25
ODF3Q96PU9 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ODF3Q96PU9 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
ODF3Q96PU9 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC13.47□□□□□ -0.25
ODF3Q96PU9 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC13.47□□□□□ -0.25
ODF3Q96PU9 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ODF3Q96PU9 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC13.47□□□□□ -0.25
ODF3Q96PU9 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ODF3Q96PU9 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ODF3Q96PU9 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ODF3Q96PU9 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ODF3Q96PU9 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC13.47□□□□□ -0.25
ODF3Q96PU9 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ODF3Q96PU9 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
ODF3Q96PU9 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms