Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATL1Q8WXF7 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATL1Q8WXF7 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ATL1Q8WXF7 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATL1Q8WXF7 ESPNP-201ENST00000270691 2015 ntBASIC17.84■□□□□ 0.45
ATL1Q8WXF7 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ATL1Q8WXF7 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATL1Q8WXF7 AC093677.2-201ENST00000600169 1863 ntBASIC17.84■□□□□ 0.45
ATL1Q8WXF7 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
ATL1Q8WXF7 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATL1Q8WXF7 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.84■□□□□ 0.45
ATL1Q8WXF7 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATL1Q8WXF7 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
ATL1Q8WXF7 AC135776.1-201ENST00000319817 2481 ntBASIC17.83■□□□□ 0.45
ATL1Q8WXF7 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.45
ATL1Q8WXF7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.83■□□□□ 0.45
ATL1Q8WXF7 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
ATL1Q8WXF7 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
ATL1Q8WXF7 NOC2LP1-202ENST00000452600 2235 ntBASIC17.83■□□□□ 0.45
ATL1Q8WXF7 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
ATL1Q8WXF7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ATL1Q8WXF7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
ATL1Q8WXF7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATL1Q8WXF7 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATL1Q8WXF7 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
ATL1Q8WXF7 AC113347.1-201ENST00000413321 391 ntBASIC17.83■□□□□ 0.44
ATL1Q8WXF7 AL137013.1-201ENST00000432946 1228 ntBASIC17.83■□□□□ 0.44
ATL1Q8WXF7 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.83■□□□□ 0.44
ATL1Q8WXF7 AC034232.1-201ENST00000506026 1064 ntBASIC17.83■□□□□ 0.44
ATL1Q8WXF7 MIR3917-201ENST00000580971 93 ntBASIC17.83■□□□□ 0.44
ATL1Q8WXF7 AC008687.5-201ENST00000593746 558 ntBASIC17.83■□□□□ 0.44
ATL1Q8WXF7 AC140113.3-201ENST00000605663 199 ntBASIC17.83■□□□□ 0.44
ATL1Q8WXF7 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.83■□□□□ 0.44
ATL1Q8WXF7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATL1Q8WXF7 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
ATL1Q8WXF7 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.83■□□□□ 0.44
ATL1Q8WXF7 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ATL1Q8WXF7 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ATL1Q8WXF7 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ATL1Q8WXF7 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.83■□□□□ 0.44
ATL1Q8WXF7 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATL1Q8WXF7 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.82■□□□□ 0.44
ATL1Q8WXF7 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
ATL1Q8WXF7 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.82■□□□□ 0.44
ATL1Q8WXF7 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATL1Q8WXF7 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATL1Q8WXF7 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATL1Q8WXF7 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.82■□□□□ 0.44
ATL1Q8WXF7 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.82■□□□□ 0.44
ATL1Q8WXF7 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATL1Q8WXF7 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATL1Q8WXF7 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.82■□□□□ 0.44
ATL1Q8WXF7 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATL1Q8WXF7 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATL1Q8WXF7 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.82■□□□□ 0.44
ATL1Q8WXF7 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.82■□□□□ 0.44
ATL1Q8WXF7 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
ATL1Q8WXF7 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.82■□□□□ 0.44
ATL1Q8WXF7 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
ATL1Q8WXF7 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.82■□□□□ 0.44
ATL1Q8WXF7 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATL1Q8WXF7 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATL1Q8WXF7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATL1Q8WXF7 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATL1Q8WXF7 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATL1Q8WXF7 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATL1Q8WXF7 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATL1Q8WXF7 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATL1Q8WXF7 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATL1Q8WXF7 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATL1Q8WXF7 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATL1Q8WXF7 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATL1Q8WXF7 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATL1Q8WXF7 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATL1Q8WXF7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
ATL1Q8WXF7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATL1Q8WXF7 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATL1Q8WXF7 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATL1Q8WXF7 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.81■□□□□ 0.44
ATL1Q8WXF7 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.81■□□□□ 0.44
ATL1Q8WXF7 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.81■□□□□ 0.44
ATL1Q8WXF7 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.81■□□□□ 0.44
ATL1Q8WXF7 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
ATL1Q8WXF7 COX11P1-201ENST00000489116 835 ntBASIC17.81■□□□□ 0.44
ATL1Q8WXF7 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATL1Q8WXF7 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.81■□□□□ 0.44
ATL1Q8WXF7 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.81■□□□□ 0.44
ATL1Q8WXF7 LINC01023-201ENST00000606054 436 ntBASIC17.81■□□□□ 0.44
ATL1Q8WXF7 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATL1Q8WXF7 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATL1Q8WXF7 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATL1Q8WXF7 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.81■□□□□ 0.44
ATL1Q8WXF7 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATL1Q8WXF7 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.81■□□□□ 0.44
ATL1Q8WXF7 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.81■□□□□ 0.44
ATL1Q8WXF7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATL1Q8WXF7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
ATL1Q8WXF7 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.8■□□□□ 0.44
ATL1Q8WXF7 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATL1Q8WXF7 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms