Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHKBP1Q8TBC3 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHKBP1Q8TBC3 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHKBP1Q8TBC3 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHKBP1Q8TBC3 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHKBP1Q8TBC3 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHKBP1Q8TBC3 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHKBP1Q8TBC3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.14■□□□□ 0.65
SHKBP1Q8TBC3 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHKBP1Q8TBC3 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHKBP1Q8TBC3 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.14■□□□□ 0.65
SHKBP1Q8TBC3 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SHKBP1Q8TBC3 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHKBP1Q8TBC3 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.14■□□□□ 0.65
SHKBP1Q8TBC3 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SHKBP1Q8TBC3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.14■□□□□ 0.65
SHKBP1Q8TBC3 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHKBP1Q8TBC3 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.14■□□□□ 0.65
SHKBP1Q8TBC3 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.14■□□□□ 0.65
SHKBP1Q8TBC3 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.14■□□□□ 0.65
SHKBP1Q8TBC3 AC004263.2-201ENST00000617183 678 ntBASIC19.14■□□□□ 0.65
SHKBP1Q8TBC3 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.14■□□□□ 0.65
SHKBP1Q8TBC3 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.14■□□□□ 0.65
SHKBP1Q8TBC3 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SHKBP1Q8TBC3 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SHKBP1Q8TBC3 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHKBP1Q8TBC3 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHKBP1Q8TBC3 NSUN5P1-202ENST00000421140 1535 ntBASIC19.14■□□□□ 0.65
SHKBP1Q8TBC3 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SHKBP1Q8TBC3 NSUN5P2-203ENST00000457352 1529 ntBASIC19.14■□□□□ 0.65
SHKBP1Q8TBC3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHKBP1Q8TBC3 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHKBP1Q8TBC3 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
SHKBP1Q8TBC3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
SHKBP1Q8TBC3 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SHKBP1Q8TBC3 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHKBP1Q8TBC3 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SHKBP1Q8TBC3 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SHKBP1Q8TBC3 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHKBP1Q8TBC3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.13■□□□□ 0.65
SHKBP1Q8TBC3 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHKBP1Q8TBC3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SHKBP1Q8TBC3 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.13■□□□□ 0.65
SHKBP1Q8TBC3 AL160237.2-201ENST00000556165 472 ntBASIC19.13■□□□□ 0.65
SHKBP1Q8TBC3 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.13■□□□□ 0.65
SHKBP1Q8TBC3 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
SHKBP1Q8TBC3 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SHKBP1Q8TBC3 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SHKBP1Q8TBC3 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHKBP1Q8TBC3 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SHKBP1Q8TBC3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHKBP1Q8TBC3 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
SHKBP1Q8TBC3 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHKBP1Q8TBC3 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHKBP1Q8TBC3 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHKBP1Q8TBC3 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.13■□□□□ 0.65
SHKBP1Q8TBC3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHKBP1Q8TBC3 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHKBP1Q8TBC3 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHKBP1Q8TBC3 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SHKBP1Q8TBC3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHKBP1Q8TBC3 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SHKBP1Q8TBC3 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHKBP1Q8TBC3 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHKBP1Q8TBC3 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHKBP1Q8TBC3 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.12■□□□□ 0.65
SHKBP1Q8TBC3 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHKBP1Q8TBC3 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.12■□□□□ 0.65
SHKBP1Q8TBC3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
SHKBP1Q8TBC3 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
SHKBP1Q8TBC3 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
SHKBP1Q8TBC3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SHKBP1Q8TBC3 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHKBP1Q8TBC3 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.12■□□□□ 0.65
SHKBP1Q8TBC3 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SHKBP1Q8TBC3 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SHKBP1Q8TBC3 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
SHKBP1Q8TBC3 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
SHKBP1Q8TBC3 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SHKBP1Q8TBC3 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
SHKBP1Q8TBC3 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.12■□□□□ 0.65
SHKBP1Q8TBC3 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.12■□□□□ 0.65
SHKBP1Q8TBC3 AP000347.1-202ENST00000435868 847 ntBASIC19.12■□□□□ 0.65
SHKBP1Q8TBC3 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SHKBP1Q8TBC3 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SHKBP1Q8TBC3 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SHKBP1Q8TBC3 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHKBP1Q8TBC3 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.12■□□□□ 0.65
SHKBP1Q8TBC3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.12■□□□□ 0.65
SHKBP1Q8TBC3 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.12■□□□□ 0.65
SHKBP1Q8TBC3 AL353801.3-201ENST00000609898 542 ntBASIC19.12■□□□□ 0.65
SHKBP1Q8TBC3 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SHKBP1Q8TBC3 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHKBP1Q8TBC3 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.12■□□□□ 0.65
SHKBP1Q8TBC3 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHKBP1Q8TBC3 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SHKBP1Q8TBC3 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.11■□□□□ 0.65
SHKBP1Q8TBC3 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.11■□□□□ 0.65
SHKBP1Q8TBC3 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.11■□□□□ 0.65
SHKBP1Q8TBC3 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms