Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDRT4Q8N9R6 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDRT4Q8N9R6 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDRT4Q8N9R6 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CDRT4Q8N9R6 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDRT4Q8N9R6 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.97■□□□□ 0.31
CDRT4Q8N9R6 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDRT4Q8N9R6 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.97■□□□□ 0.31
CDRT4Q8N9R6 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.97■□□□□ 0.31
CDRT4Q8N9R6 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.97■□□□□ 0.31
CDRT4Q8N9R6 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CDRT4Q8N9R6 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDRT4Q8N9R6 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CDRT4Q8N9R6 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDRT4Q8N9R6 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDRT4Q8N9R6 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.97■□□□□ 0.31
CDRT4Q8N9R6 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.97■□□□□ 0.31
CDRT4Q8N9R6 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDRT4Q8N9R6 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDRT4Q8N9R6 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDRT4Q8N9R6 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.97■□□□□ 0.31
CDRT4Q8N9R6 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDRT4Q8N9R6 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDRT4Q8N9R6 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.97■□□□□ 0.31
CDRT4Q8N9R6 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDRT4Q8N9R6 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CDRT4Q8N9R6 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CDRT4Q8N9R6 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.96■□□□□ 0.31
CDRT4Q8N9R6 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.96■□□□□ 0.31
CDRT4Q8N9R6 AC073508.3-201ENST00000619697 1419 ntBASIC16.96■□□□□ 0.31
CDRT4Q8N9R6 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDRT4Q8N9R6 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CDRT4Q8N9R6 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.96■□□□□ 0.31
CDRT4Q8N9R6 AC138028.4-201ENST00000564984 1845 ntBASIC16.96■□□□□ 0.31
CDRT4Q8N9R6 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDRT4Q8N9R6 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDRT4Q8N9R6 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDRT4Q8N9R6 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDRT4Q8N9R6 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.96■□□□□ 0.31
CDRT4Q8N9R6 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDRT4Q8N9R6 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDRT4Q8N9R6 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.96■□□□□ 0.31
CDRT4Q8N9R6 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.96■□□□□ 0.31
CDRT4Q8N9R6 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CDRT4Q8N9R6 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDRT4Q8N9R6 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.96■□□□□ 0.31
CDRT4Q8N9R6 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.96■□□□□ 0.31
CDRT4Q8N9R6 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CDRT4Q8N9R6 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDRT4Q8N9R6 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDRT4Q8N9R6 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CDRT4Q8N9R6 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDRT4Q8N9R6 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.96■□□□□ 0.31
CDRT4Q8N9R6 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDRT4Q8N9R6 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CDRT4Q8N9R6 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CDRT4Q8N9R6 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.3
CDRT4Q8N9R6 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.96■□□□□ 0.3
CDRT4Q8N9R6 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CDRT4Q8N9R6 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.96■□□□□ 0.3
CDRT4Q8N9R6 FLJ13224-201ENST00000313737 1514 ntBASIC16.96■□□□□ 0.3
CDRT4Q8N9R6 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.96■□□□□ 0.3
CDRT4Q8N9R6 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.96■□□□□ 0.3
CDRT4Q8N9R6 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDRT4Q8N9R6 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDRT4Q8N9R6 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDRT4Q8N9R6 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDRT4Q8N9R6 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDRT4Q8N9R6 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.95■□□□□ 0.3
CDRT4Q8N9R6 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDRT4Q8N9R6 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDRT4Q8N9R6 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDRT4Q8N9R6 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDRT4Q8N9R6 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDRT4Q8N9R6 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDRT4Q8N9R6 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.95■□□□□ 0.3
CDRT4Q8N9R6 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDRT4Q8N9R6 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDRT4Q8N9R6 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDRT4Q8N9R6 AC005521.1-201ENST00000393351 872 ntBASIC16.95■□□□□ 0.3
CDRT4Q8N9R6 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CDRT4Q8N9R6 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CDRT4Q8N9R6 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CDRT4Q8N9R6 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
CDRT4Q8N9R6 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDRT4Q8N9R6 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDRT4Q8N9R6 AC093010.1-201ENST00000473625 1624 ntBASIC16.95■□□□□ 0.3
CDRT4Q8N9R6 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDRT4Q8N9R6 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDRT4Q8N9R6 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDRT4Q8N9R6 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
CDRT4Q8N9R6 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDRT4Q8N9R6 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CDRT4Q8N9R6 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDRT4Q8N9R6 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.94■□□□□ 0.3
CDRT4Q8N9R6 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.94■□□□□ 0.3
CDRT4Q8N9R6 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDRT4Q8N9R6 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDRT4Q8N9R6 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDRT4Q8N9R6 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms