Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TRIM48Q8IWZ4 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM48Q8IWZ4 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM48Q8IWZ4 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.92■□□□□ 0.46
TRIM48Q8IWZ4 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM48Q8IWZ4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM48Q8IWZ4 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM48Q8IWZ4 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM48Q8IWZ4 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM48Q8IWZ4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM48Q8IWZ4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
TRIM48Q8IWZ4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.91■□□□□ 0.46
TRIM48Q8IWZ4 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM48Q8IWZ4 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.91■□□□□ 0.46
TRIM48Q8IWZ4 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
TRIM48Q8IWZ4 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.91■□□□□ 0.46
TRIM48Q8IWZ4 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM48Q8IWZ4 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM48Q8IWZ4 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.91■□□□□ 0.46
TRIM48Q8IWZ4 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM48Q8IWZ4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM48Q8IWZ4 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TRIM48Q8IWZ4 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM48Q8IWZ4 MIR662-201ENST00000384847 95 ntBASIC17.91■□□□□ 0.46
TRIM48Q8IWZ4 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM48Q8IWZ4 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM48Q8IWZ4 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM48Q8IWZ4 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.91■□□□□ 0.46
TRIM48Q8IWZ4 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TRIM48Q8IWZ4 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TRIM48Q8IWZ4 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.91■□□□□ 0.46
TRIM48Q8IWZ4 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM48Q8IWZ4 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM48Q8IWZ4 AP003733.1-201ENST00000491725 852 ntBASIC17.91■□□□□ 0.46
TRIM48Q8IWZ4 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.91■□□□□ 0.46
TRIM48Q8IWZ4 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.91■□□□□ 0.46
TRIM48Q8IWZ4 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.91■□□□□ 0.46
TRIM48Q8IWZ4 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.91■□□□□ 0.46
TRIM48Q8IWZ4 AL121672.3-201ENST00000608644 468 ntBASIC17.91■□□□□ 0.46
TRIM48Q8IWZ4 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TRIM48Q8IWZ4 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.91■□□□□ 0.46
TRIM48Q8IWZ4 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM48Q8IWZ4 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM48Q8IWZ4 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM48Q8IWZ4 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM48Q8IWZ4 MYLKP1-201ENST00000509077 1580 ntBASIC17.91■□□□□ 0.46
TRIM48Q8IWZ4 AC093525.10-201ENST00000625130 1569 ntBASIC17.91■□□□□ 0.46
TRIM48Q8IWZ4 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.91■□□□□ 0.46
TRIM48Q8IWZ4 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TRIM48Q8IWZ4 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM48Q8IWZ4 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM48Q8IWZ4 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM48Q8IWZ4 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM48Q8IWZ4 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TRIM48Q8IWZ4 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM48Q8IWZ4 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM48Q8IWZ4 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM48Q8IWZ4 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
TRIM48Q8IWZ4 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM48Q8IWZ4 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM48Q8IWZ4 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM48Q8IWZ4 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM48Q8IWZ4 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM48Q8IWZ4 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
TRIM48Q8IWZ4 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.9■□□□□ 0.46
TRIM48Q8IWZ4 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.9■□□□□ 0.46
TRIM48Q8IWZ4 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TRIM48Q8IWZ4 AC024563.2-201ENST00000603282 481 ntBASIC17.9■□□□□ 0.46
TRIM48Q8IWZ4 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
TRIM48Q8IWZ4 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.9■□□□□ 0.46
TRIM48Q8IWZ4 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM48Q8IWZ4 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM48Q8IWZ4 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TRIM48Q8IWZ4 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM48Q8IWZ4 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM48Q8IWZ4 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TRIM48Q8IWZ4 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM48Q8IWZ4 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM48Q8IWZ4 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.89■□□□□ 0.46
TRIM48Q8IWZ4 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
TRIM48Q8IWZ4 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
TRIM48Q8IWZ4 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
TRIM48Q8IWZ4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TRIM48Q8IWZ4 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM48Q8IWZ4 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM48Q8IWZ4 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.89■□□□□ 0.45
TRIM48Q8IWZ4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.89■□□□□ 0.45
TRIM48Q8IWZ4 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM48Q8IWZ4 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM48Q8IWZ4 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM48Q8IWZ4 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM48Q8IWZ4 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM48Q8IWZ4 MIR149-201ENST00000384879 89 ntBASIC17.89■□□□□ 0.45
TRIM48Q8IWZ4 HCG4P8-203ENST00000443049 980 ntBASIC17.89■□□□□ 0.45
TRIM48Q8IWZ4 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.89■□□□□ 0.45
TRIM48Q8IWZ4 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.89■□□□□ 0.45
TRIM48Q8IWZ4 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.89■□□□□ 0.45
TRIM48Q8IWZ4 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.89■□□□□ 0.45
TRIM48Q8IWZ4 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TRIM48Q8IWZ4 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms