Protein–RNA interactions for Protein: Q86YD7

FAM90A1, Protein FAM90A1, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A1Q86YD7 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FAM90A1Q86YD7 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
FAM90A1Q86YD7 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.33■□□□□ 0.04
FAM90A1Q86YD7 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.33■□□□□ 0.04
FAM90A1Q86YD7 HLA-F-220ENST00000434407 884 ntBASIC15.33■□□□□ 0.04
FAM90A1Q86YD7 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.33■□□□□ 0.04
FAM90A1Q86YD7 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
FAM90A1Q86YD7 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC15.33■□□□□ 0.04
FAM90A1Q86YD7 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.33■□□□□ 0.04
FAM90A1Q86YD7 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
FAM90A1Q86YD7 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.33■□□□□ 0.04
FAM90A1Q86YD7 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.33■□□□□ 0.04
FAM90A1Q86YD7 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC15.33■□□□□ 0.04
FAM90A1Q86YD7 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.33■□□□□ 0.04
FAM90A1Q86YD7 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.33■□□□□ 0.04
FAM90A1Q86YD7 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
FAM90A1Q86YD7 AC083849.1-201ENST00000615227 514 ntBASIC15.33■□□□□ 0.04
FAM90A1Q86YD7 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
FAM90A1Q86YD7 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FAM90A1Q86YD7 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
FAM90A1Q86YD7 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
FAM90A1Q86YD7 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
FAM90A1Q86YD7 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
FAM90A1Q86YD7 KRT89P-201ENST00000620027 1478 ntBASIC15.33■□□□□ 0.04
FAM90A1Q86YD7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
FAM90A1Q86YD7 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FAM90A1Q86YD7 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
FAM90A1Q86YD7 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
FAM90A1Q86YD7 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
FAM90A1Q86YD7 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FAM90A1Q86YD7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FAM90A1Q86YD7 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC15.32■□□□□ 0.04
FAM90A1Q86YD7 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
FAM90A1Q86YD7 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
FAM90A1Q86YD7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
FAM90A1Q86YD7 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
FAM90A1Q86YD7 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FAM90A1Q86YD7 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
FAM90A1Q86YD7 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
FAM90A1Q86YD7 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FAM90A1Q86YD7 AL031133.1-201ENST00000406807 723 ntBASIC15.32■□□□□ 0.04
FAM90A1Q86YD7 SLC25A6P5-201ENST00000435663 894 ntBASIC15.32■□□□□ 0.04
FAM90A1Q86YD7 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.32■□□□□ 0.04
FAM90A1Q86YD7 KRT18P35-201ENST00000510488 1269 ntBASIC15.32■□□□□ 0.04
FAM90A1Q86YD7 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.32■□□□□ 0.04
FAM90A1Q86YD7 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.32■□□□□ 0.04
FAM90A1Q86YD7 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.32■□□□□ 0.04
FAM90A1Q86YD7 AC087388.1-201ENST00000571370 1112 ntBASIC15.32■□□□□ 0.04
FAM90A1Q86YD7 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
FAM90A1Q86YD7 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.32■□□□□ 0.04
FAM90A1Q86YD7 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.32■□□□□ 0.04
FAM90A1Q86YD7 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FAM90A1Q86YD7 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FAM90A1Q86YD7 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FAM90A1Q86YD7 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FAM90A1Q86YD7 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FAM90A1Q86YD7 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
FAM90A1Q86YD7 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.32■□□□□ 0.04
FAM90A1Q86YD7 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
FAM90A1Q86YD7 FLJ13224-201ENST00000313737 1514 ntBASIC15.32■□□□□ 0.04
FAM90A1Q86YD7 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FAM90A1Q86YD7 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC15.32■□□□□ 0.04
FAM90A1Q86YD7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FAM90A1Q86YD7 PHGDH-209ENST00000641074 1780 ntBASIC15.31■□□□□ 0.04
FAM90A1Q86YD7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
FAM90A1Q86YD7 MCC-208ENST00000514701 2855 ntTSL 2 BASIC15.31■□□□□ 0.04
FAM90A1Q86YD7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.31■□□□□ 0.04
FAM90A1Q86YD7 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FAM90A1Q86YD7 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
FAM90A1Q86YD7 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.31■□□□□ 0.04
FAM90A1Q86YD7 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC15.31■□□□□ 0.04
FAM90A1Q86YD7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
FAM90A1Q86YD7 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FAM90A1Q86YD7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC15.31■□□□□ 0.04
FAM90A1Q86YD7 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
FAM90A1Q86YD7 AC113404.2-201ENST00000507884 177 ntBASIC15.31■□□□□ 0.04
FAM90A1Q86YD7 VENTXP5-201ENST00000523979 775 ntBASIC15.31■□□□□ 0.04
FAM90A1Q86YD7 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
FAM90A1Q86YD7 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
FAM90A1Q86YD7 AL445228.2-201ENST00000605589 952 ntBASIC15.31■□□□□ 0.04
FAM90A1Q86YD7 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
FAM90A1Q86YD7 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.31■□□□□ 0.04
FAM90A1Q86YD7 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
FAM90A1Q86YD7 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC15.31■□□□□ 0.04
FAM90A1Q86YD7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
FAM90A1Q86YD7 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.31■□□□□ 0.04
FAM90A1Q86YD7 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
FAM90A1Q86YD7 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FAM90A1Q86YD7 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FAM90A1Q86YD7 AC093010.1-201ENST00000473625 1624 ntBASIC15.31■□□□□ 0.04
FAM90A1Q86YD7 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FAM90A1Q86YD7 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FAM90A1Q86YD7 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
FAM90A1Q86YD7 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.31■□□□□ 0.04
FAM90A1Q86YD7 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
FAM90A1Q86YD7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FAM90A1Q86YD7 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
FAM90A1Q86YD7 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FAM90A1Q86YD7 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FAM90A1Q86YD7 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms