Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF111Q6ZNA4 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF111Q6ZNA4 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
RNF111Q6ZNA4 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF111Q6ZNA4 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF111Q6ZNA4 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF111Q6ZNA4 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF111Q6ZNA4 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF111Q6ZNA4 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF111Q6ZNA4 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF111Q6ZNA4 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.74■□□□□ 0.43
RNF111Q6ZNA4 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RNF111Q6ZNA4 AP005242.2-201ENST00000580065 1175 ntBASIC17.74■□□□□ 0.43
RNF111Q6ZNA4 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.74■□□□□ 0.43
RNF111Q6ZNA4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF111Q6ZNA4 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.74■□□□□ 0.43
RNF111Q6ZNA4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF111Q6ZNA4 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF111Q6ZNA4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF111Q6ZNA4 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.74■□□□□ 0.43
RNF111Q6ZNA4 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF111Q6ZNA4 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF111Q6ZNA4 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF111Q6ZNA4 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.73■□□□□ 0.43
RNF111Q6ZNA4 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.73■□□□□ 0.43
RNF111Q6ZNA4 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.73■□□□□ 0.43
RNF111Q6ZNA4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF111Q6ZNA4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF111Q6ZNA4 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF111Q6ZNA4 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF111Q6ZNA4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.73■□□□□ 0.43
RNF111Q6ZNA4 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF111Q6ZNA4 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.73■□□□□ 0.43
RNF111Q6ZNA4 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
RNF111Q6ZNA4 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF111Q6ZNA4 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF111Q6ZNA4 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
RNF111Q6ZNA4 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF111Q6ZNA4 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.73■□□□□ 0.43
RNF111Q6ZNA4 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
RNF111Q6ZNA4 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF111Q6ZNA4 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.73■□□□□ 0.43
RNF111Q6ZNA4 AL390955.1-201ENST00000428694 934 ntBASIC17.73■□□□□ 0.43
RNF111Q6ZNA4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.73■□□□□ 0.43
RNF111Q6ZNA4 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.73■□□□□ 0.43
RNF111Q6ZNA4 BX088651.1-201ENST00000540551 451 ntBASIC17.73■□□□□ 0.43
RNF111Q6ZNA4 FITM1-202ENST00000559294 800 ntBASIC17.73■□□□□ 0.43
RNF111Q6ZNA4 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.73■□□□□ 0.43
RNF111Q6ZNA4 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF111Q6ZNA4 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.73■□□□□ 0.43
RNF111Q6ZNA4 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RNF111Q6ZNA4 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.73■□□□□ 0.43
RNF111Q6ZNA4 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
RNF111Q6ZNA4 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.73■□□□□ 0.43
RNF111Q6ZNA4 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF111Q6ZNA4 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF111Q6ZNA4 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RNF111Q6ZNA4 AC011676.5-201ENST00000624864 2660 ntBASIC17.73■□□□□ 0.43
RNF111Q6ZNA4 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF111Q6ZNA4 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF111Q6ZNA4 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF111Q6ZNA4 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF111Q6ZNA4 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.72■□□□□ 0.43
RNF111Q6ZNA4 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF111Q6ZNA4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
RNF111Q6ZNA4 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF111Q6ZNA4 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF111Q6ZNA4 NKILA-202ENST00000614771 2598 ntBASIC17.72■□□□□ 0.43
RNF111Q6ZNA4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF111Q6ZNA4 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.72■□□□□ 0.43
RNF111Q6ZNA4 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF111Q6ZNA4 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF111Q6ZNA4 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF111Q6ZNA4 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF111Q6ZNA4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF111Q6ZNA4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF111Q6ZNA4 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
RNF111Q6ZNA4 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF111Q6ZNA4 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF111Q6ZNA4 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF111Q6ZNA4 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF111Q6ZNA4 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF111Q6ZNA4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
RNF111Q6ZNA4 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF111Q6ZNA4 AC018695.7-201ENST00000624587 2492 ntBASIC17.72■□□□□ 0.43
RNF111Q6ZNA4 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF111Q6ZNA4 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF111Q6ZNA4 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.72■□□□□ 0.43
RNF111Q6ZNA4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF111Q6ZNA4 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF111Q6ZNA4 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF111Q6ZNA4 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF111Q6ZNA4 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF111Q6ZNA4 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF111Q6ZNA4 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF111Q6ZNA4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RNF111Q6ZNA4 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.71■□□□□ 0.43
RNF111Q6ZNA4 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF111Q6ZNA4 MMP23A-201ENST00000234610 1017 ntBASIC17.71■□□□□ 0.43
RNF111Q6ZNA4 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms