Protein–RNA interactions for Protein: P98155

VLDLR, Very low-density lipoprotein receptor, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLRP98155 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VLDLRP98155 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VLDLRP98155 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VLDLRP98155 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VLDLRP98155 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VLDLRP98155 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.07■□□□□ 0.32
VLDLRP98155 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VLDLRP98155 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VLDLRP98155 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VLDLRP98155 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VLDLRP98155 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
VLDLRP98155 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
VLDLRP98155 PRORSD1P-202ENST00000563365 2154 ntBASIC17.07■□□□□ 0.32
VLDLRP98155 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VLDLRP98155 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VLDLRP98155 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VLDLRP98155 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VLDLRP98155 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VLDLRP98155 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VLDLRP98155 KSR1P1-201ENST00000446298 240 ntBASIC17.07■□□□□ 0.32
VLDLRP98155 SNORA78-201ENST00000459373 127 ntBASIC17.07■□□□□ 0.32
VLDLRP98155 AC133681.1-201ENST00000465482 601 ntBASIC17.07■□□□□ 0.32
VLDLRP98155 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.07■□□□□ 0.32
VLDLRP98155 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.07■□□□□ 0.32
VLDLRP98155 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.07■□□□□ 0.32
VLDLRP98155 AC110285.5-201ENST00000611501 352 ntBASIC17.07■□□□□ 0.32
VLDLRP98155 AC011298.2-201ENST00000617989 482 ntBASIC17.07■□□□□ 0.32
VLDLRP98155 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.07■□□□□ 0.32
VLDLRP98155 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.07■□□□□ 0.32
VLDLRP98155 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
VLDLRP98155 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VLDLRP98155 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
VLDLRP98155 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
VLDLRP98155 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.07■□□□□ 0.32
VLDLRP98155 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VLDLRP98155 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VLDLRP98155 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
VLDLRP98155 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VLDLRP98155 GMCL1P1-201ENST00000463439 1581 ntBASIC17.06■□□□□ 0.32
VLDLRP98155 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.06■□□□□ 0.32
VLDLRP98155 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
VLDLRP98155 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VLDLRP98155 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VLDLRP98155 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.06■□□□□ 0.32
VLDLRP98155 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VLDLRP98155 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VLDLRP98155 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VLDLRP98155 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
VLDLRP98155 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VLDLRP98155 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VLDLRP98155 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
VLDLRP98155 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
VLDLRP98155 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.06■□□□□ 0.32
VLDLRP98155 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VLDLRP98155 AP002982.1-201ENST00000492365 877 ntBASIC17.06■□□□□ 0.32
VLDLRP98155 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VLDLRP98155 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
VLDLRP98155 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.06■□□□□ 0.32
VLDLRP98155 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.06■□□□□ 0.32
VLDLRP98155 AC008622.2-201ENST00000617006 1229 ntBASIC17.06■□□□□ 0.32
VLDLRP98155 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VLDLRP98155 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VLDLRP98155 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.06■□□□□ 0.32
VLDLRP98155 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.06■□□□□ 0.32
VLDLRP98155 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
VLDLRP98155 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VLDLRP98155 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
VLDLRP98155 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VLDLRP98155 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.06■□□□□ 0.32
VLDLRP98155 AC009053.2-201ENST00000563701 2365 ntBASIC17.06■□□□□ 0.32
VLDLRP98155 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.05■□□□□ 0.32
VLDLRP98155 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.05■□□□□ 0.32
VLDLRP98155 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.05■□□□□ 0.32
VLDLRP98155 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
VLDLRP98155 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VLDLRP98155 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VLDLRP98155 PP12613-201ENST00000424958 2230 ntBASIC17.05■□□□□ 0.32
VLDLRP98155 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.05■□□□□ 0.32
VLDLRP98155 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VLDLRP98155 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.05■□□□□ 0.32
VLDLRP98155 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VLDLRP98155 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
VLDLRP98155 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
VLDLRP98155 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VLDLRP98155 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.05■□□□□ 0.32
VLDLRP98155 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.05■□□□□ 0.32
VLDLRP98155 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
VLDLRP98155 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.05■□□□□ 0.32
VLDLRP98155 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VLDLRP98155 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VLDLRP98155 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VLDLRP98155 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VLDLRP98155 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VLDLRP98155 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VLDLRP98155 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.05■□□□□ 0.32
VLDLRP98155 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VLDLRP98155 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VLDLRP98155 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
VLDLRP98155 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.05■□□□□ 0.32
VLDLRP98155 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms