Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
IRX4P78413 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.99■□□□□ 0.63
IRX4P78413 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.99■□□□□ 0.63
IRX4P78413 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.99■□□□□ 0.63
IRX4P78413 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
IRX4P78413 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
IRX4P78413 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.99■□□□□ 0.63
IRX4P78413 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.99■□□□□ 0.63
IRX4P78413 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
IRX4P78413 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
IRX4P78413 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
IRX4P78413 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
IRX4P78413 LINC01311-201ENST00000565162 1445 ntBASIC18.99■□□□□ 0.63
IRX4P78413 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
IRX4P78413 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
IRX4P78413 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.98■□□□□ 0.63
IRX4P78413 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.98■□□□□ 0.63
IRX4P78413 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
IRX4P78413 AC093525.10-201ENST00000625130 1569 ntBASIC18.98■□□□□ 0.63
IRX4P78413 FZD10-202ENST00000539839 3282 ntBASIC18.98■□□□□ 0.63
IRX4P78413 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
IRX4P78413 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.98■□□□□ 0.63
IRX4P78413 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
IRX4P78413 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
IRX4P78413 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.98■□□□□ 0.63
IRX4P78413 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.98■□□□□ 0.63
IRX4P78413 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
IRX4P78413 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
IRX4P78413 STARP1-201ENST00000397973 869 ntBASIC18.98■□□□□ 0.63
IRX4P78413 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
IRX4P78413 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
IRX4P78413 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
IRX4P78413 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.98■□□□□ 0.63
IRX4P78413 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.98■□□□□ 0.63
IRX4P78413 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.98■□□□□ 0.63
IRX4P78413 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
IRX4P78413 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
IRX4P78413 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
IRX4P78413 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
IRX4P78413 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
IRX4P78413 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
IRX4P78413 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.98■□□□□ 0.63
IRX4P78413 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
IRX4P78413 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
IRX4P78413 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
IRX4P78413 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
IRX4P78413 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
IRX4P78413 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
IRX4P78413 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
IRX4P78413 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
IRX4P78413 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
IRX4P78413 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
IRX4P78413 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
IRX4P78413 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
IRX4P78413 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.97■□□□□ 0.63
IRX4P78413 GCSHP2-201ENST00000560971 527 ntBASIC18.97■□□□□ 0.63
IRX4P78413 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
IRX4P78413 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
IRX4P78413 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
IRX4P78413 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.97■□□□□ 0.63
IRX4P78413 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
IRX4P78413 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
IRX4P78413 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
IRX4P78413 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
IRX4P78413 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
IRX4P78413 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.96■□□□□ 0.63
IRX4P78413 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.96■□□□□ 0.63
IRX4P78413 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
IRX4P78413 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.96■□□□□ 0.63
IRX4P78413 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.96■□□□□ 0.63
IRX4P78413 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
IRX4P78413 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
IRX4P78413 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.96■□□□□ 0.63
IRX4P78413 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
IRX4P78413 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
IRX4P78413 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
IRX4P78413 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
IRX4P78413 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.96■□□□□ 0.63
IRX4P78413 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.96■□□□□ 0.63
IRX4P78413 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.96■□□□□ 0.63
IRX4P78413 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
IRX4P78413 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
IRX4P78413 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.96■□□□□ 0.63
IRX4P78413 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
IRX4P78413 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.96■□□□□ 0.63
IRX4P78413 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.96■□□□□ 0.63
IRX4P78413 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
IRX4P78413 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.62
IRX4P78413 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
IRX4P78413 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IRX4P78413 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
IRX4P78413 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.95■□□□□ 0.62
IRX4P78413 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.95■□□□□ 0.62
IRX4P78413 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IRX4P78413 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
IRX4P78413 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
IRX4P78413 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
IRX4P78413 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
IRX4P78413 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IRX4P78413 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms