Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.46■□□□□ 0.71
CDH8P55286 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.46■□□□□ 0.71
CDH8P55286 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.46■□□□□ 0.71
CDH8P55286 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDH8P55286 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.46■□□□□ 0.71
CDH8P55286 Z83836.1-201ENST00000624605 1642 ntBASIC19.46■□□□□ 0.71
CDH8P55286 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDH8P55286 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH8P55286 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
CDH8P55286 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH8P55286 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH8P55286 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
CDH8P55286 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.46■□□□□ 0.71
CDH8P55286 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH8P55286 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH8P55286 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDH8P55286 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDH8P55286 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDH8P55286 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDH8P55286 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDH8P55286 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CDH8P55286 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CDH8P55286 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.45■□□□□ 0.7
CDH8P55286 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.45■□□□□ 0.7
CDH8P55286 IGHGP-201ENST00000390555 1178 ntBASIC19.45■□□□□ 0.7
CDH8P55286 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.45■□□□□ 0.7
CDH8P55286 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.45■□□□□ 0.7
CDH8P55286 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDH8P55286 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDH8P55286 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDH8P55286 AC004263.2-201ENST00000617183 678 ntBASIC19.45■□□□□ 0.7
CDH8P55286 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.45■□□□□ 0.7
CDH8P55286 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.45■□□□□ 0.7
CDH8P55286 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CDH8P55286 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDH8P55286 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDH8P55286 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDH8P55286 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CDH8P55286 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.45■□□□□ 0.7
CDH8P55286 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.45■□□□□ 0.7
CDH8P55286 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDH8P55286 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.44■□□□□ 0.7
CDH8P55286 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDH8P55286 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CDH8P55286 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDH8P55286 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDH8P55286 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CDH8P55286 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CDH8P55286 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CDH8P55286 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDH8P55286 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.44■□□□□ 0.7
CDH8P55286 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.44■□□□□ 0.7
CDH8P55286 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.44■□□□□ 0.7
CDH8P55286 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.44■□□□□ 0.7
CDH8P55286 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.44■□□□□ 0.7
CDH8P55286 AC091076.1-201ENST00000610741 619 ntBASIC19.44■□□□□ 0.7
CDH8P55286 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDH8P55286 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDH8P55286 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDH8P55286 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CDH8P55286 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.44■□□□□ 0.7
CDH8P55286 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDH8P55286 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDH8P55286 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDH8P55286 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDH8P55286 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CDH8P55286 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDH8P55286 KRT89P-201ENST00000620027 1478 ntBASIC19.43■□□□□ 0.7
CDH8P55286 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH8P55286 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH8P55286 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH8P55286 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CDH8P55286 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH8P55286 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDH8P55286 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDH8P55286 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH8P55286 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH8P55286 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDH8P55286 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDH8P55286 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDH8P55286 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.43■□□□□ 0.7
CDH8P55286 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CDH8P55286 AL390719.2-201ENST00000606993 987 ntBASIC19.43■□□□□ 0.7
CDH8P55286 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.43■□□□□ 0.7
CDH8P55286 LINC00602-201ENST00000629776 2065 ntBASIC19.43■□□□□ 0.7
CDH8P55286 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH8P55286 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH8P55286 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.43■□□□□ 0.7
CDH8P55286 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CDH8P55286 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CDH8P55286 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH8P55286 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.43■□□□□ 0.7
CDH8P55286 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CDH8P55286 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.43■□□□□ 0.7
CDH8P55286 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CDH8P55286 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDH8P55286 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH8P55286 BICD1-207ENST00000551848 1962 ntBASIC19.43■□□□□ 0.7
CDH8P55286 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH8P55286 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms