Protein–RNA interactions for Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 AP2M1-209ENST00000448139 601 ntTSL 511.09□□□□□ -0.632e-12■□□□□ 8.5
SUB1P53999 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.651e-6■□□□□ 8.5
SUB1P53999 AP2M1-210ENST00000455925 545 ntTSL 410.96□□□□□ -0.652e-12■□□□□ 8.5
SUB1P53999 AP2M1-216ENST00000472560 910 ntTSL 210.86□□□□□ -0.672e-12■□□□□ 8.5
SUB1P53999 AP2M1-205ENST00000431779 602 ntTSL 39.17□□□□□ -0.942e-12■□□□□ 8.5
SUB1P53999 NAP1L1-206ENST00000544816 1597 ntTSL 2 BASIC9.16□□□□□ -0.941e-6■□□□□ 8.5
SUB1P53999 NAP1L1-205ENST00000542344 1675 ntTSL 2 BASIC8.89□□□□□ -0.991e-6■□□□□ 8.5
SUB1P53999 PHF19-214ENST00000616568 4159 ntTSL 1 (best) BASIC8.37□□□□□ -1.071e-6■□□□□ 8.5
SUB1P53999 EIF3D-205ENST00000432675 678 ntTSL 28.31□□□□□ -1.081e-6■□□□□ 8.5
SUB1P53999 PHF19-204ENST00000436309 558 ntTSL 48.17□□□□□ -1.11e-6■□□□□ 8.5
SUB1P53999 ETFB-202ENST00000354232 3551 ntTSL 1 (best) BASIC8.1□□□□□ -1.111e-6■□□□□ 8.5
SUB1P53999 EIF3D-206ENST00000455547 996 ntTSL 57.62□□□□□ -1.191e-6■□□□□ 8.5
SUB1P53999 EIF3D-202ENST00000402116 581 ntTSL 36.98□□□□□ -1.291e-6■□□□□ 8.5
SUB1P53999 UBQLN1-206ENST00000533705 6055 ntTSL 1 (best)5.81□□□□□ -1.481e-6■□□□□ 8.5
SUB1P53999 USP7-210ENST00000565455 3554 ntTSL 24.37□□□□□ -1.711e-6■□□□□ 8.5
SUB1P53999 EIF4A2-217ENST00000475409 802 ntTSL 24.08□□□□□ -1.761e-6■□□□□ 8.5
SUB1P53999 RAN-209ENST00000539498 1659 ntTSL 23.82□□□□□ -1.85e-18■□□□□ 8.5
SUB1P53999 LAMTOR5-205ENST00000531779 569 ntTSL 216.69■□□□□ 0.267e-17■□□□□ 8.5
SUB1P53999 TFR2-207ENST00000473374 891 ntTSL 515.14■□□□□ 0.016e-9■□□□□ 8.5
SUB1P53999 TFR2-204ENST00000462090 1844 ntTSL 515.05■□□□□ -06e-9■□□□□ 8.5
SUB1P53999 TFR2-212ENST00000476304 2421 ntTSL 513.83□□□□□ -0.196e-9■□□□□ 8.5
SUB1P53999 TFR2-213ENST00000490084 2196 ntTSL 213.81□□□□□ -0.26e-9■□□□□ 8.5
SUB1P53999 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC12.83□□□□□ -0.366e-9■□□□□ 8.5
SUB1P53999 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.526e-9■□□□□ 8.5
SUB1P53999 PRRC2A-206ENST00000464890 593 ntTSL 211.62□□□□□ -0.556e-9■□□□□ 8.5
SUB1P53999 TFR2-209ENST00000473963 771 ntTSL 311.37□□□□□ -0.596e-9■□□□□ 8.5
SUB1P53999 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.686e-9■□□□□ 8.5
SUB1P53999 PRRC2A-208ENST00000469577 918 ntTSL 510.75□□□□□ -0.696e-9■□□□□ 8.5
SUB1P53999 TFR2-206ENST00000465294 2763 ntTSL 210.51□□□□□ -0.736e-9■□□□□ 8.5
SUB1P53999 MIR632-201ENST00000385193 94 ntBASIC9.84□□□□□ -0.833e-21■□□□□ 8.4
SUB1P53999 ZNF207-201ENST00000321233 2283 ntTSL 1 (best) BASIC8.2□□□□□ -1.13e-21■□□□□ 8.4
SUB1P53999 ZNF207-212ENST00000580759 572 ntTSL 58.16□□□□□ -1.13e-21■□□□□ 8.4
SUB1P53999 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC7.32□□□□□ -1.243e-21■□□□□ 8.4
SUB1P53999 ZNF207-204ENST00000394673 2124 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.253e-21■□□□□ 8.4
SUB1P53999 ZNF207-210ENST00000579634 580 ntTSL 37.19□□□□□ -1.263e-21■□□□□ 8.4
SUB1P53999 ZNF207-202ENST00000342555 1905 ntTSL 5 BASIC6.6□□□□□ -1.353e-21■□□□□ 8.4
SUB1P53999 ZNF207-214ENST00000582165 592 ntTSL 55.93□□□□□ -1.463e-21■□□□□ 8.4
SUB1P53999 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.643e-21■□□□□ 8.4
SUB1P53999 ZNF207-206ENST00000577324 1005 ntTSL 23.69□□□□□ -1.823e-21■□□□□ 8.4
SUB1P53999 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.21□□□□□ -1.93e-21■□□□□ 8.4
SUB1P53999 ZNF207-205ENST00000394679 847 ntTSL 32.3□□□□□ -2.043e-21■□□□□ 8.4
SUB1P53999 AC005899.4-202ENST00000578389 429 ntTSL 21.67□□□□□ -2.143e-21■□□□□ 8.4
SUB1P53999 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.687e-9■□□□□ 8.4
SUB1P53999 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.47e-9■□□□□ 8.4
SUB1P53999 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.267e-9■□□□□ 8.4
SUB1P53999 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.457e-9■□□□□ 8.4
SUB1P53999 COMT-201ENST00000207636 1319 ntTSL 511.52□□□□□ -0.577e-9■□□□□ 8.4
SUB1P53999 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.577e-9■□□□□ 8.4
SUB1P53999 ATP5C1-203ENST00000460362 414 ntTSL 311.06□□□□□ -0.647e-9■□□□□ 8.4
SUB1P53999 NSA2-201ENST00000296802 1199 ntTSL 5 BASIC9.85□□□□□ -0.837e-9■□□□□ 8.4
SUB1P53999 ATP5C1-205ENST00000462760 573 ntTSL 29.55□□□□□ -0.887e-9■□□□□ 8.4
SUB1P53999 ATP5C1-204ENST00000460820 622 ntTSL 29.53□□□□□ -0.887e-9■□□□□ 8.4
SUB1P53999 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.297e-9■□□□□ 8.4
SUB1P53999 NSA2-202ENST00000513356 797 ntTSL 34.73□□□□□ -1.657e-9■□□□□ 8.4
SUB1P53999 ATP5C1-207ENST00000472202 782 ntTSL 23.82□□□□□ -1.87e-9■□□□□ 8.4
SUB1P53999 NSA2-204ENST00000515524 448 ntTSL 22.71□□□□□ -1.987e-9■□□□□ 8.4
SUB1P53999 RPS8-207ENST00000485390 1115 ntTSL 1 (best)15.12■□□□□ 0.015e-37■□□□□ 8.4
SUB1P53999 RPS8-208ENST00000497035 694 ntTSL 311.49□□□□□ -0.575e-37■□□□□ 8.4
SUB1P53999 RPS8-206ENST00000484599 852 ntTSL 38.64□□□□□ -1.035e-37■□□□□ 8.4
SUB1P53999 RPS8-202ENST00000396651 881 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.065e-37■□□□□ 8.4
SUB1P53999 RPS8-201ENST00000372209 685 ntTSL 2 BASIC7.98□□□□□ -1.135e-37■□□□□ 8.4
SUB1P53999 RPS8-203ENST00000464658 898 ntTSL 26.76□□□□□ -1.335e-37■□□□□ 8.4
SUB1P53999 ACTN4-208ENST00000497637 877 ntTSL 215.69■□□□□ 0.13e-13■□□□□ 8.4
SUB1P53999 RPS2-207ENST00000527826 837 ntTSL 1 (best)18.57■□□□□ 0.562e-15■□□□□ 8.3
SUB1P53999 PSMD14-202ENST00000437630 577 ntTSL 57.58□□□□□ -1.22e-6■□□□□ 8.3
SUB1P53999 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.981e-7■□□□□ 8.3
SUB1P53999 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.36■□□□□ 0.378e-10■□□□□ 8.3
SUB1P53999 ANAPC11-209ENST00000573956 2136 nt15.07■□□□□ 01e-7■□□□□ 8.3
SUB1P53999 PSMB7-203ENST00000466951 462 ntTSL 312.86□□□□□ -0.351e-7■□□□□ 8.3
SUB1P53999 ALDOC-205ENST00000460201 922 ntTSL 210.72□□□□□ -0.691e-7■□□□□ 8.3
SUB1P53999 ALDOC-209ENST00000584086 686 ntTSL 310.5□□□□□ -0.731e-7■□□□□ 8.3
SUB1P53999 CHPT1-206ENST00000550385 754 ntTSL 58.43□□□□□ -1.061e-7■□□□□ 8.3
SUB1P53999 ALDOC-207ENST00000581807 580 ntTSL 38.41□□□□□ -1.061e-7■□□□□ 8.3
SUB1P53999 CHPT1-209ENST00000552329 580 ntTSL 43.87□□□□□ -1.791e-7■□□□□ 8.3
SUB1P53999 PRPS1-201ENST00000372418 942 ntTSL 3 BASIC7.29□□□□□ -1.242e-6■□□□□ 8.3
SUB1P53999 RPL13A-206ENST00000476268 1623 ntTSL 314.46□□□□□ -0.092e-41■□□□□ 8.3
SUB1P53999 RPL13A-208ENST00000477613 796 ntTSL 513.19□□□□□ -0.32e-41■□□□□ 8.3
SUB1P53999 RPL13A-209ENST00000479992 850 ntTSL 312.18□□□□□ -0.462e-41■□□□□ 8.3
SUB1P53999 RPL13A-204ENST00000472481 728 ntTSL 211.6□□□□□ -0.552e-41■□□□□ 8.3
SUB1P53999 RPL13A-211ENST00000486930 652 ntTSL 311.52□□□□□ -0.572e-41■□□□□ 8.3
SUB1P53999 RPL13A-202ENST00000467825 660 ntTSL 511.12□□□□□ -0.632e-41■□□□□ 8.3
SUB1P53999 RPL13A-210ENST00000484279 794 ntTSL 510.33□□□□□ -0.762e-41■□□□□ 8.3
SUB1P53999 MPP1-206ENST00000417435 970 ntTSL 513.35□□□□□ -0.279e-10■□□□□ 8.3
SUB1P53999 CSNK2B-206ENST00000468255 1792 ntTSL 512.21□□□□□ -0.459e-10■□□□□ 8.3
SUB1P53999 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC11.49□□□□□ -0.579e-10■□□□□ 8.3
SUB1P53999 AL662899.3-203ENST00000409691 1903 ntTSL 311.45□□□□□ -0.589e-10■□□□□ 8.3
SUB1P53999 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.582e-7■□□□□ 8.3
SUB1P53999 MPP1-218ENST00000494170 969 ntTSL 311.29□□□□□ -0.69e-10■□□□□ 8.3
SUB1P53999 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.619e-10■□□□□ 8.3
SUB1P53999 MPP1-211ENST00000471821 558 ntTSL 210.35□□□□□ -0.759e-10■□□□□ 8.3
SUB1P53999 MPP1-212ENST00000475943 860 ntTSL 1 (best)10.35□□□□□ -0.759e-10■□□□□ 8.3
SUB1P53999 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.769e-10■□□□□ 8.3
SUB1P53999 MPP1-201ENST00000369531 519 ntTSL 39.99□□□□□ -0.819e-10■□□□□ 8.3
SUB1P53999 MPP1-207ENST00000428488 581 ntTSL 39.83□□□□□ -0.849e-10■□□□□ 8.3
SUB1P53999 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC9.2□□□□□ -0.942e-16■□□□□ 8.3
SUB1P53999 AL662899.3-201ENST00000375880 2487 ntAPPRIS P1 TSL 3 BASIC9.07□□□□□ -0.969e-10■□□□□ 8.3
SUB1P53999 AL662899.3-202ENST00000617558 991 ntTSL 1 (best) BASIC9.05□□□□□ -0.969e-10■□□□□ 8.3
SUB1P53999 MPP1-209ENST00000453245 729 ntTSL 58.81□□□□□ -19e-10■□□□□ 8.3
SUB1P53999 RPL38-206ENST00000533498 532 ntAPPRIS P2 TSL 2 BASIC8.8□□□□□ -12e-16■□□□□ 8.3
SUB1P53999 CSNK2B-204ENST00000375885 1061 ntTSL 5 BASIC8.27□□□□□ -1.099e-10■□□□□ 8.3
Retrieved 100 of 11,644 protein–RNA pairs in 208 ms