Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.42■□□□□ 0.54
LIMK2P53671 AL031432.5-201ENST00000641059 760 ntBASIC18.42■□□□□ 0.54
LIMK2P53671 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LIMK2P53671 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LIMK2P53671 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.42■□□□□ 0.54
LIMK2P53671 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LIMK2P53671 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
LIMK2P53671 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LIMK2P53671 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
LIMK2P53671 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.42■□□□□ 0.54
LIMK2P53671 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
LIMK2P53671 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
LIMK2P53671 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LIMK2P53671 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LIMK2P53671 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.41■□□□□ 0.54
LIMK2P53671 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LIMK2P53671 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LIMK2P53671 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.41■□□□□ 0.54
LIMK2P53671 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LIMK2P53671 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LIMK2P53671 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.41■□□□□ 0.54
LIMK2P53671 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.41■□□□□ 0.54
LIMK2P53671 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.41■□□□□ 0.54
LIMK2P53671 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.41■□□□□ 0.54
LIMK2P53671 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.41■□□□□ 0.54
LIMK2P53671 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LIMK2P53671 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.41■□□□□ 0.54
LIMK2P53671 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
LIMK2P53671 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.41■□□□□ 0.54
LIMK2P53671 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LIMK2P53671 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
LIMK2P53671 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LIMK2P53671 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LIMK2P53671 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LIMK2P53671 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
LIMK2P53671 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.4■□□□□ 0.54
LIMK2P53671 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.4■□□□□ 0.54
LIMK2P53671 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
LIMK2P53671 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LIMK2P53671 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LIMK2P53671 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
LIMK2P53671 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LIMK2P53671 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
LIMK2P53671 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LIMK2P53671 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LIMK2P53671 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LIMK2P53671 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
LIMK2P53671 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.4■□□□□ 0.54
LIMK2P53671 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.4■□□□□ 0.54
LIMK2P53671 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.4■□□□□ 0.54
LIMK2P53671 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LIMK2P53671 AC092647.4-201ENST00000457211 535 ntBASIC18.4■□□□□ 0.54
LIMK2P53671 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.4■□□□□ 0.54
LIMK2P53671 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.4■□□□□ 0.54
LIMK2P53671 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.4■□□□□ 0.54
LIMK2P53671 AC011558.1-201ENST00000623459 338 ntBASIC18.4■□□□□ 0.54
LIMK2P53671 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LIMK2P53671 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
LIMK2P53671 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
LIMK2P53671 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
LIMK2P53671 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.4■□□□□ 0.54
LIMK2P53671 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.4■□□□□ 0.54
LIMK2P53671 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LIMK2P53671 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.4■□□□□ 0.54
LIMK2P53671 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
LIMK2P53671 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LIMK2P53671 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
LIMK2P53671 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
LIMK2P53671 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
LIMK2P53671 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
LIMK2P53671 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.39■□□□□ 0.54
LIMK2P53671 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.39■□□□□ 0.54
LIMK2P53671 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
LIMK2P53671 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
LIMK2P53671 AP000997.3-201ENST00000623333 2250 ntBASIC18.39■□□□□ 0.54
LIMK2P53671 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.39■□□□□ 0.53
LIMK2P53671 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LIMK2P53671 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LIMK2P53671 GMCL1P1-201ENST00000463439 1581 ntBASIC18.39■□□□□ 0.53
LIMK2P53671 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LIMK2P53671 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.39■□□□□ 0.53
LIMK2P53671 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.39■□□□□ 0.53
LIMK2P53671 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LIMK2P53671 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LIMK2P53671 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.39■□□□□ 0.53
LIMK2P53671 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LIMK2P53671 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.39■□□□□ 0.53
LIMK2P53671 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.39■□□□□ 0.53
LIMK2P53671 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
LIMK2P53671 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
LIMK2P53671 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
LIMK2P53671 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LIMK2P53671 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LIMK2P53671 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
LIMK2P53671 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.39■□□□□ 0.53
LIMK2P53671 FLJ13224-201ENST00000313737 1514 ntBASIC18.39■□□□□ 0.53
LIMK2P53671 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LIMK2P53671 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
LIMK2P53671 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
LIMK2P53671 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms