Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDX1P52945 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDX1P52945 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDX1P52945 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDX1P52945 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDX1P52945 AKR1C7P-201ENST00000305623 895 ntBASIC17.71■□□□□ 0.43
PDX1P52945 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PDX1P52945 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
PDX1P52945 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
PDX1P52945 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.71■□□□□ 0.43
PDX1P52945 AL022342.1-201ENST00000400363 863 ntBASIC17.71■□□□□ 0.43
PDX1P52945 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.71■□□□□ 0.43
PDX1P52945 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.71■□□□□ 0.43
PDX1P52945 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
PDX1P52945 AP005901.3-202ENST00000581653 237 ntBASIC17.71■□□□□ 0.43
PDX1P52945 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.71■□□□□ 0.43
PDX1P52945 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDX1P52945 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PDX1P52945 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PDX1P52945 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDX1P52945 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.71■□□□□ 0.43
PDX1P52945 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDX1P52945 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDX1P52945 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
PDX1P52945 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDX1P52945 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PDX1P52945 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.7■□□□□ 0.42
PDX1P52945 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PDX1P52945 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDX1P52945 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDX1P52945 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDX1P52945 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.7■□□□□ 0.42
PDX1P52945 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.7■□□□□ 0.42
PDX1P52945 RN7SL606P-201ENST00000472779 293 ntBASIC17.7■□□□□ 0.42
PDX1P52945 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.7■□□□□ 0.42
PDX1P52945 Z69720.1-201ENST00000601483 472 ntBASIC17.7■□□□□ 0.42
PDX1P52945 AC099336.1-202ENST00000602961 463 ntBASIC17.7■□□□□ 0.42
PDX1P52945 AL353801.3-201ENST00000609898 542 ntBASIC17.7■□□□□ 0.42
PDX1P52945 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.7■□□□□ 0.42
PDX1P52945 AC068587.9-201ENST00000641814 219 ntBASIC17.7■□□□□ 0.42
PDX1P52945 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDX1P52945 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDX1P52945 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.7■□□□□ 0.42
PDX1P52945 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDX1P52945 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.7■□□□□ 0.42
PDX1P52945 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDX1P52945 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.69■□□□□ 0.42
PDX1P52945 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.69■□□□□ 0.42
PDX1P52945 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDX1P52945 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.69■□□□□ 0.42
PDX1P52945 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDX1P52945 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.69■□□□□ 0.42
PDX1P52945 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDX1P52945 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDX1P52945 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDX1P52945 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
PDX1P52945 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PDX1P52945 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDX1P52945 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDX1P52945 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PDX1P52945 MRPL3P1-201ENST00000400109 1033 ntBASIC17.69■□□□□ 0.42
PDX1P52945 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PDX1P52945 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.69■□□□□ 0.42
PDX1P52945 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.69■□□□□ 0.42
PDX1P52945 AC091607.1-201ENST00000490318 1060 ntBASIC17.69■□□□□ 0.42
PDX1P52945 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.69■□□□□ 0.42
PDX1P52945 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.69■□□□□ 0.42
PDX1P52945 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.69■□□□□ 0.42
PDX1P52945 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.69■□□□□ 0.42
PDX1P52945 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.69■□□□□ 0.42
PDX1P52945 LINC01711-201ENST00000598340 967 ntBASIC17.69■□□□□ 0.42
PDX1P52945 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.69■□□□□ 0.42
PDX1P52945 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.69■□□□□ 0.42
PDX1P52945 AL121912.1-201ENST00000603683 238 ntBASIC17.69■□□□□ 0.42
PDX1P52945 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PDX1P52945 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PDX1P52945 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.69■□□□□ 0.42
PDX1P52945 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.69■□□□□ 0.42
PDX1P52945 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.69■□□□□ 0.42
PDX1P52945 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDX1P52945 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PDX1P52945 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PDX1P52945 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.68■□□□□ 0.42
PDX1P52945 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDX1P52945 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDX1P52945 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDX1P52945 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
PDX1P52945 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PDX1P52945 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.68■□□□□ 0.42
PDX1P52945 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.68■□□□□ 0.42
PDX1P52945 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDX1P52945 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.68■□□□□ 0.42
PDX1P52945 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDX1P52945 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDX1P52945 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDX1P52945 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
PDX1P52945 TSPY12P-201ENST00000421279 868 ntBASIC17.68■□□□□ 0.42
PDX1P52945 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.68■□□□□ 0.42
PDX1P52945 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.68■□□□□ 0.42
PDX1P52945 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms