Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 TPM4P1-201ENST00000436100 807 ntBASIC17.13■□□□□ 0.33
SMSP52788 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SMSP52788 Z85996.1-201ENST00000494644 937 ntBASIC17.13■□□□□ 0.33
SMSP52788 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.13■□□□□ 0.33
SMSP52788 FAM86EP-206ENST00000510506 987 ntBASIC17.13■□□□□ 0.33
SMSP52788 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.13■□□□□ 0.33
SMSP52788 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.13■□□□□ 0.33
SMSP52788 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.13■□□□□ 0.33
SMSP52788 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.13■□□□□ 0.33
SMSP52788 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.13■□□□□ 0.33
SMSP52788 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
SMSP52788 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
SMSP52788 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMSP52788 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMSP52788 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.13■□□□□ 0.33
SMSP52788 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.13■□□□□ 0.33
SMSP52788 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMSP52788 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMSP52788 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SMSP52788 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMSP52788 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMSP52788 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMSP52788 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.13■□□□□ 0.33
SMSP52788 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.12■□□□□ 0.33
SMSP52788 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMSP52788 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SMSP52788 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SMSP52788 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SMSP52788 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
SMSP52788 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMSP52788 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMSP52788 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMSP52788 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.12■□□□□ 0.33
SMSP52788 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.12■□□□□ 0.33
SMSP52788 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.12■□□□□ 0.33
SMSP52788 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.12■□□□□ 0.33
SMSP52788 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.12■□□□□ 0.33
SMSP52788 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SMSP52788 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMSP52788 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SMSP52788 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.12■□□□□ 0.33
SMSP52788 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SMSP52788 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMSP52788 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMSP52788 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.12■□□□□ 0.33
SMSP52788 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMSP52788 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMSP52788 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SMSP52788 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMSP52788 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMSP52788 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SMSP52788 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMSP52788 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SMSP52788 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.11■□□□□ 0.33
SMSP52788 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SMSP52788 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
SMSP52788 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMSP52788 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
SMSP52788 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.11■□□□□ 0.33
SMSP52788 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SMSP52788 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMSP52788 TSPY23P-201ENST00000440136 739 ntBASIC17.11■□□□□ 0.33
SMSP52788 AL359075.1-203ENST00000462729 1002 ntBASIC17.11■□□□□ 0.33
SMSP52788 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.11■□□□□ 0.33
SMSP52788 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.11■□□□□ 0.33
SMSP52788 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMSP52788 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMSP52788 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.11■□□□□ 0.33
SMSP52788 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SMSP52788 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMSP52788 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.11■□□□□ 0.33
SMSP52788 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMSP52788 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SMSP52788 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMSP52788 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.11■□□□□ 0.33
SMSP52788 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMSP52788 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SMSP52788 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SMSP52788 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.11■□□□□ 0.33
SMSP52788 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMSP52788 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMSP52788 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.11■□□□□ 0.33
SMSP52788 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMSP52788 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.1■□□□□ 0.33
SMSP52788 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMSP52788 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMSP52788 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMSP52788 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMSP52788 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.1■□□□□ 0.33
SMSP52788 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMSP52788 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMSP52788 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMSP52788 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.1■□□□□ 0.33
SMSP52788 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.1■□□□□ 0.33
SMSP52788 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMSP52788 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.1■□□□□ 0.33
SMSP52788 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.1■□□□□ 0.33
SMSP52788 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.1■□□□□ 0.33
SMSP52788 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMSP52788 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms