Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CENPAP49450 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CENPAP49450 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CENPAP49450 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.56■□□□□ 0.24
CENPAP49450 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.56■□□□□ 0.24
CENPAP49450 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CENPAP49450 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CENPAP49450 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
CENPAP49450 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CENPAP49450 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CENPAP49450 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.56■□□□□ 0.24
CENPAP49450 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CENPAP49450 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CENPAP49450 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
CENPAP49450 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CENPAP49450 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
CENPAP49450 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
CENPAP49450 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.56■□□□□ 0.24
CENPAP49450 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CENPAP49450 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.56■□□□□ 0.24
CENPAP49450 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
CENPAP49450 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CENPAP49450 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CENPAP49450 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CENPAP49450 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CENPAP49450 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.56■□□□□ 0.24
CENPAP49450 MFAP1P1-201ENST00000442257 1255 ntBASIC16.56■□□□□ 0.24
CENPAP49450 AL355355.2-201ENST00000442321 338 ntBASIC16.56■□□□□ 0.24
CENPAP49450 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.56■□□□□ 0.24
CENPAP49450 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.56■□□□□ 0.24
CENPAP49450 AC097488.1-201ENST00000507834 756 ntBASIC16.56■□□□□ 0.24
CENPAP49450 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.56■□□□□ 0.24
CENPAP49450 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.56■□□□□ 0.24
CENPAP49450 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.56■□□□□ 0.24
CENPAP49450 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.56■□□□□ 0.24
CENPAP49450 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CENPAP49450 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.56■□□□□ 0.24
CENPAP49450 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.56■□□□□ 0.24
CENPAP49450 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CENPAP49450 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CENPAP49450 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CENPAP49450 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CENPAP49450 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CENPAP49450 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CENPAP49450 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CENPAP49450 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CENPAP49450 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CENPAP49450 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
CENPAP49450 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.55■□□□□ 0.24
CENPAP49450 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CENPAP49450 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.55■□□□□ 0.24
CENPAP49450 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
CENPAP49450 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.55■□□□□ 0.24
CENPAP49450 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CENPAP49450 AC005332.8-201ENST00000622750 2735 ntBASIC16.55■□□□□ 0.24
CENPAP49450 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.55■□□□□ 0.24
CENPAP49450 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CENPAP49450 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CENPAP49450 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.55■□□□□ 0.24
CENPAP49450 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CENPAP49450 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.55■□□□□ 0.24
CENPAP49450 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CENPAP49450 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CENPAP49450 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.55■□□□□ 0.24
CENPAP49450 RPS2P55-201ENST00000397318 883 ntBASIC16.55■□□□□ 0.24
CENPAP49450 CRYGFP-201ENST00000418459 633 ntBASIC16.55■□□□□ 0.24
CENPAP49450 AC098590.1-201ENST00000468126 897 ntBASIC16.55■□□□□ 0.24
CENPAP49450 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CENPAP49450 AC107956.1-201ENST00000494359 873 ntBASIC16.55■□□□□ 0.24
CENPAP49450 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CENPAP49450 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.55■□□□□ 0.24
CENPAP49450 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.55■□□□□ 0.24
CENPAP49450 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
CENPAP49450 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.55■□□□□ 0.24
CENPAP49450 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.55■□□□□ 0.24
CENPAP49450 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.55■□□□□ 0.24
CENPAP49450 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CENPAP49450 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CENPAP49450 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CENPAP49450 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.55■□□□□ 0.24
CENPAP49450 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.55■□□□□ 0.24
CENPAP49450 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CENPAP49450 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CENPAP49450 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CENPAP49450 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.55■□□□□ 0.24
CENPAP49450 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CENPAP49450 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CENPAP49450 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CENPAP49450 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CENPAP49450 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.55■□□□□ 0.24
CENPAP49450 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CENPAP49450 AC008556.1-201ENST00000610908 2040 ntBASIC16.55■□□□□ 0.24
CENPAP49450 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CENPAP49450 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CENPAP49450 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
CENPAP49450 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CENPAP49450 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CENPAP49450 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CENPAP49450 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CENPAP49450 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms