Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRPHP41219 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRPHP41219 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRPHP41219 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
PRPHP41219 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.61■□□□□ 0.89
PRPHP41219 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRPHP41219 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRPHP41219 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.61■□□□□ 0.89
PRPHP41219 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.61■□□□□ 0.89
PRPHP41219 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRPHP41219 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRPHP41219 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRPHP41219 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRPHP41219 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRPHP41219 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRPHP41219 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRPHP41219 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
PRPHP41219 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PRPHP41219 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PRPHP41219 RCN1P1-201ENST00000400413 996 ntBASIC20.61■□□□□ 0.89
PRPHP41219 HOMER2P1-201ENST00000455653 964 ntBASIC20.61■□□□□ 0.89
PRPHP41219 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PRPHP41219 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.61■□□□□ 0.89
PRPHP41219 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.61■□□□□ 0.89
PRPHP41219 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.61■□□□□ 0.89
PRPHP41219 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.61■□□□□ 0.89
PRPHP41219 REXO1L9P-201ENST00000604264 2108 ntBASIC20.61■□□□□ 0.89
PRPHP41219 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.61■□□□□ 0.89
PRPHP41219 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PRPHP41219 FLJ13224-201ENST00000313737 1514 ntBASIC20.61■□□□□ 0.89
PRPHP41219 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PRPHP41219 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.61■□□□□ 0.89
PRPHP41219 KRT89P-201ENST00000620027 1478 ntBASIC20.61■□□□□ 0.89
PRPHP41219 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRPHP41219 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.61■□□□□ 0.89
PRPHP41219 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRPHP41219 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRPHP41219 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.61■□□□□ 0.89
PRPHP41219 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
PRPHP41219 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRPHP41219 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRPHP41219 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRPHP41219 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRPHP41219 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRPHP41219 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.6■□□□□ 0.89
PRPHP41219 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.6■□□□□ 0.89
PRPHP41219 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRPHP41219 AC138028.4-201ENST00000564984 1845 ntBASIC20.6■□□□□ 0.89
PRPHP41219 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRPHP41219 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.6■□□□□ 0.89
PRPHP41219 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.6■□□□□ 0.89
PRPHP41219 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRPHP41219 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
PRPHP41219 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
PRPHP41219 AK4P3-201ENST00000418260 669 ntBASIC20.6■□□□□ 0.89
PRPHP41219 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.6■□□□□ 0.89
PRPHP41219 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PRPHP41219 HLA-F-220ENST00000434407 884 ntBASIC20.6■□□□□ 0.89
PRPHP41219 AC104076.2-201ENST00000448912 469 ntBASIC20.6■□□□□ 0.89
PRPHP41219 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.6■□□□□ 0.89
PRPHP41219 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRPHP41219 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRPHP41219 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PRPHP41219 AL391807.1-203ENST00000604392 2365 ntBASIC20.6■□□□□ 0.89
PRPHP41219 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PRPHP41219 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRPHP41219 BCL2-203ENST00000589955 5011 ntBASIC20.6■□□□□ 0.89
PRPHP41219 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRPHP41219 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRPHP41219 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRPHP41219 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PRPHP41219 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRPHP41219 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.59■□□□□ 0.89
PRPHP41219 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRPHP41219 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.59■□□□□ 0.89
PRPHP41219 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRPHP41219 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.59■□□□□ 0.89
PRPHP41219 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.59■□□□□ 0.89
PRPHP41219 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.59■□□□□ 0.89
PRPHP41219 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PRPHP41219 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PRPHP41219 AL136038.4-201ENST00000603606 1261 ntBASIC20.59■□□□□ 0.89
PRPHP41219 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
PRPHP41219 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRPHP41219 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
PRPHP41219 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.59■□□□□ 0.89
PRPHP41219 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
PRPHP41219 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.59■□□□□ 0.89
PRPHP41219 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRPHP41219 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRPHP41219 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRPHP41219 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.59■□□□□ 0.89
PRPHP41219 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRPHP41219 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PRPHP41219 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PRPHP41219 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PRPHP41219 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PRPHP41219 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.58■□□□□ 0.89
PRPHP41219 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PRPHP41219 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms