Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HADHAP40939 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HADHAP40939 AL133373.2-201ENST00000623187 2828 ntBASIC18.49■□□□□ 0.55
HADHAP40939 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HADHAP40939 LIN28AP1-201ENST00000429574 405 ntBASIC18.49■□□□□ 0.55
HADHAP40939 AC009947.2-201ENST00000444014 672 ntBASIC18.49■□□□□ 0.55
HADHAP40939 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HADHAP40939 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.49■□□□□ 0.55
HADHAP40939 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HADHAP40939 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.49■□□□□ 0.55
HADHAP40939 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
HADHAP40939 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HADHAP40939 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HADHAP40939 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HADHAP40939 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.49■□□□□ 0.55
HADHAP40939 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
HADHAP40939 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HADHAP40939 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HADHAP40939 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.49■□□□□ 0.55
HADHAP40939 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.49■□□□□ 0.55
HADHAP40939 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HADHAP40939 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HADHAP40939 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HADHAP40939 AC008764.6-201ENST00000595909 2069 ntBASIC18.48■□□□□ 0.55
HADHAP40939 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.48■□□□□ 0.55
HADHAP40939 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.48■□□□□ 0.55
HADHAP40939 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HADHAP40939 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
HADHAP40939 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HADHAP40939 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HADHAP40939 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.48■□□□□ 0.55
HADHAP40939 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HADHAP40939 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HADHAP40939 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.48■□□□□ 0.55
HADHAP40939 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HADHAP40939 AC104390.1-201ENST00000555663 520 ntBASIC18.48■□□□□ 0.55
HADHAP40939 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.48■□□□□ 0.55
HADHAP40939 MIR3180-4-201ENST00000582223 153 ntBASIC18.48■□□□□ 0.55
HADHAP40939 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.48■□□□□ 0.55
HADHAP40939 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.48■□□□□ 0.55
HADHAP40939 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HADHAP40939 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.48■□□□□ 0.55
HADHAP40939 AC005363.2-201ENST00000618631 242 ntBASIC18.48■□□□□ 0.55
HADHAP40939 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HADHAP40939 OR6D1P-202ENST00000641007 5290 ntBASIC18.48■□□□□ 0.55
HADHAP40939 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HADHAP40939 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
HADHAP40939 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HADHAP40939 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HADHAP40939 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HADHAP40939 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.48■□□□□ 0.55
HADHAP40939 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HADHAP40939 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
HADHAP40939 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
HADHAP40939 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HADHAP40939 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.47■□□□□ 0.55
HADHAP40939 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
HADHAP40939 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
HADHAP40939 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HADHAP40939 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HADHAP40939 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.47■□□□□ 0.55
HADHAP40939 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HADHAP40939 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HADHAP40939 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HADHAP40939 ATP5G1P1-201ENST00000448724 379 ntBASIC18.47■□□□□ 0.55
HADHAP40939 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.47■□□□□ 0.55
HADHAP40939 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.47■□□□□ 0.55
HADHAP40939 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.47■□□□□ 0.55
HADHAP40939 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
HADHAP40939 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
HADHAP40939 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HADHAP40939 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
HADHAP40939 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HADHAP40939 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HADHAP40939 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HADHAP40939 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.47■□□□□ 0.55
HADHAP40939 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HADHAP40939 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HADHAP40939 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HADHAP40939 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
HADHAP40939 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HADHAP40939 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HADHAP40939 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HADHAP40939 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HADHAP40939 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
HADHAP40939 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HADHAP40939 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.46■□□□□ 0.55
HADHAP40939 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HADHAP40939 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HADHAP40939 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HADHAP40939 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HADHAP40939 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.46■□□□□ 0.55
HADHAP40939 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.46■□□□□ 0.55
HADHAP40939 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.46■□□□□ 0.55
HADHAP40939 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HADHAP40939 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
HADHAP40939 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HADHAP40939 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
HADHAP40939 AL163051.1-201ENST00000569214 1512 ntBASIC18.46■□□□□ 0.55
HADHAP40939 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms