Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC15.92■□□□□ 0.14
GDNFP39905 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
GDNFP39905 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC15.92■□□□□ 0.14
GDNFP39905 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC15.92■□□□□ 0.14
GDNFP39905 AC004264.1-201ENST00000608354 794 ntBASIC15.92■□□□□ 0.14
GDNFP39905 AC110285.5-201ENST00000611501 352 ntBASIC15.92■□□□□ 0.14
GDNFP39905 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC15.92■□□□□ 0.14
GDNFP39905 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC15.92■□□□□ 0.14
GDNFP39905 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
GDNFP39905 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
GDNFP39905 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
GDNFP39905 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
GDNFP39905 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.92■□□□□ 0.14
GDNFP39905 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
GDNFP39905 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC15.92■□□□□ 0.14
GDNFP39905 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
GDNFP39905 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.92■□□□□ 0.14
GDNFP39905 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.91■□□□□ 0.14
GDNFP39905 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GDNFP39905 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GDNFP39905 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GDNFP39905 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GDNFP39905 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GDNFP39905 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
GDNFP39905 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.91■□□□□ 0.14
GDNFP39905 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
GDNFP39905 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
GDNFP39905 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
GDNFP39905 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
GDNFP39905 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC15.91■□□□□ 0.14
GDNFP39905 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
GDNFP39905 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC15.91■□□□□ 0.14
GDNFP39905 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
GDNFP39905 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC15.91■□□□□ 0.14
GDNFP39905 AL359736.2-201ENST00000621992 437 ntBASIC15.91■□□□□ 0.14
GDNFP39905 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
GDNFP39905 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
GDNFP39905 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
GDNFP39905 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
GDNFP39905 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC15.91■□□□□ 0.14
GDNFP39905 AC112777.1-201ENST00000540175 1423 ntBASIC15.91■□□□□ 0.14
GDNFP39905 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
GDNFP39905 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GDNFP39905 RCC2P6-201ENST00000526625 1557 ntBASIC15.91■□□□□ 0.14
GDNFP39905 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
GDNFP39905 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC15.91■□□□□ 0.14
GDNFP39905 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GDNFP39905 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC15.91■□□□□ 0.14
GDNFP39905 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
GDNFP39905 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GDNFP39905 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
GDNFP39905 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
GDNFP39905 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
GDNFP39905 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GDNFP39905 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GDNFP39905 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.9■□□□□ 0.14
GDNFP39905 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
GDNFP39905 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
GDNFP39905 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
GDNFP39905 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.9■□□□□ 0.14
GDNFP39905 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
GDNFP39905 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GDNFP39905 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
GDNFP39905 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GDNFP39905 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
GDNFP39905 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
GDNFP39905 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
GDNFP39905 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.9■□□□□ 0.14
GDNFP39905 TSPY23P-201ENST00000440136 739 ntBASIC15.9■□□□□ 0.14
GDNFP39905 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
GDNFP39905 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC15.9■□□□□ 0.14
GDNFP39905 KRT16P5-201ENST00000455284 522 ntBASIC15.9■□□□□ 0.14
GDNFP39905 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.9■□□□□ 0.14
GDNFP39905 AC098590.1-201ENST00000468126 897 ntBASIC15.9■□□□□ 0.14
GDNFP39905 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.9■□□□□ 0.14
GDNFP39905 HLA-A-209ENST00000638375 975 ntBASIC15.9■□□□□ 0.14
GDNFP39905 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GDNFP39905 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
GDNFP39905 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GDNFP39905 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GDNFP39905 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.9■□□□□ 0.14
GDNFP39905 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.9■□□□□ 0.14
GDNFP39905 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
GDNFP39905 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
GDNFP39905 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GDNFP39905 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GDNFP39905 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
GDNFP39905 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
GDNFP39905 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
GDNFP39905 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
GDNFP39905 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC15.9■□□□□ 0.14
GDNFP39905 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
GDNFP39905 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GDNFP39905 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GDNFP39905 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GDNFP39905 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.9■□□□□ 0.14
GDNFP39905 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GDNFP39905 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.14
GDNFP39905 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.89■□□□□ 0.14
GDNFP39905 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms