Protein–RNA interactions for Protein: P39900

MMP12, Macrophage metalloelastase, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP12P39900 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MMP12P39900 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MMP12P39900 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP12P39900 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MMP12P39900 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP12P39900 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP12P39900 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
MMP12P39900 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MMP12P39900 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
MMP12P39900 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP12P39900 PHGDH-209ENST00000641074 1780 ntBASIC18.1■□□□□ 0.49
MMP12P39900 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MMP12P39900 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MMP12P39900 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.1■□□□□ 0.49
MMP12P39900 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MMP12P39900 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MMP12P39900 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP12P39900 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP12P39900 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP12P39900 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
MMP12P39900 AP000867.3-201ENST00000524675 377 ntBASIC18.1■□□□□ 0.49
MMP12P39900 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.1■□□□□ 0.49
MMP12P39900 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP12P39900 AL353801.3-201ENST00000609898 542 ntBASIC18.1■□□□□ 0.49
MMP12P39900 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MMP12P39900 AC009154.2-201ENST00000621177 724 ntBASIC18.1■□□□□ 0.49
MMP12P39900 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP12P39900 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MMP12P39900 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.1■□□□□ 0.49
MMP12P39900 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP12P39900 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.1■□□□□ 0.49
MMP12P39900 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP12P39900 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP12P39900 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP12P39900 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MMP12P39900 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP12P39900 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP12P39900 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP12P39900 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.09■□□□□ 0.49
MMP12P39900 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP12P39900 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP12P39900 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.09■□□□□ 0.49
MMP12P39900 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MMP12P39900 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP12P39900 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP12P39900 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP12P39900 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.09■□□□□ 0.49
MMP12P39900 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MMP12P39900 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP12P39900 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MMP12P39900 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.09■□□□□ 0.49
MMP12P39900 AC246785.2-201ENST00000432512 513 ntBASIC18.09■□□□□ 0.49
MMP12P39900 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP12P39900 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.09■□□□□ 0.49
MMP12P39900 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
MMP12P39900 AC012615.1-201ENST00000565797 1299 ntBASIC18.09■□□□□ 0.49
MMP12P39900 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP12P39900 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.09■□□□□ 0.49
MMP12P39900 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP12P39900 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.09■□□□□ 0.49
MMP12P39900 AC012313.10-201ENST00000623509 926 ntBASIC18.09■□□□□ 0.49
MMP12P39900 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
MMP12P39900 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
MMP12P39900 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.09■□□□□ 0.49
MMP12P39900 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP12P39900 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
MMP12P39900 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.09■□□□□ 0.49
MMP12P39900 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
MMP12P39900 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP12P39900 AC132938.6-201ENST00000623828 1655 ntBASIC18.09■□□□□ 0.49
MMP12P39900 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MMP12P39900 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP12P39900 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.08■□□□□ 0.49
MMP12P39900 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
MMP12P39900 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
MMP12P39900 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
MMP12P39900 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
MMP12P39900 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
MMP12P39900 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.08■□□□□ 0.49
MMP12P39900 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
MMP12P39900 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
MMP12P39900 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MMP12P39900 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MMP12P39900 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MMP12P39900 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
MMP12P39900 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MMP12P39900 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
MMP12P39900 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
MMP12P39900 KRT18P65-201ENST00000439811 1286 ntBASIC18.08■□□□□ 0.48
MMP12P39900 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.08■□□□□ 0.48
MMP12P39900 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.08■□□□□ 0.48
MMP12P39900 AP005901.3-202ENST00000581653 237 ntBASIC18.08■□□□□ 0.48
MMP12P39900 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
MMP12P39900 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
MMP12P39900 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.08■□□□□ 0.48
MMP12P39900 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.08■□□□□ 0.48
MMP12P39900 AC093010.1-201ENST00000473625 1624 ntBASIC18.08■□□□□ 0.48
MMP12P39900 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
MMP12P39900 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
MMP12P39900 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms