Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHC1P29353 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHC1P29353 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHC1P29353 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHC1P29353 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.75■□□□□ 0.27
SHC1P29353 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHC1P29353 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHC1P29353 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHC1P29353 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHC1P29353 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.75■□□□□ 0.27
SHC1P29353 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.75■□□□□ 0.27
SHC1P29353 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.75■□□□□ 0.27
SHC1P29353 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHC1P29353 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHC1P29353 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SHC1P29353 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHC1P29353 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHC1P29353 AC099343.3-201ENST00000605834 2503 ntBASIC16.74■□□□□ 0.27
SHC1P29353 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHC1P29353 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHC1P29353 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHC1P29353 AC034236.2-201ENST00000606662 1610 ntBASIC16.74■□□□□ 0.27
SHC1P29353 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
SHC1P29353 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHC1P29353 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHC1P29353 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.74■□□□□ 0.27
SHC1P29353 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.74■□□□□ 0.27
SHC1P29353 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHC1P29353 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHC1P29353 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHC1P29353 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHC1P29353 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.74■□□□□ 0.27
SHC1P29353 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHC1P29353 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHC1P29353 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SHC1P29353 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.74■□□□□ 0.27
SHC1P29353 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.74■□□□□ 0.27
SHC1P29353 BX664615.1-201ENST00000443558 458 ntBASIC16.74■□□□□ 0.27
SHC1P29353 COX11P1-201ENST00000489116 835 ntBASIC16.74■□□□□ 0.27
SHC1P29353 YBX1P2-201ENST00000489612 999 ntBASIC16.74■□□□□ 0.27
SHC1P29353 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.74■□□□□ 0.27
SHC1P29353 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.74■□□□□ 0.27
SHC1P29353 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SHC1P29353 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
SHC1P29353 AC011558.1-201ENST00000623459 338 ntBASIC16.74■□□□□ 0.27
SHC1P29353 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHC1P29353 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SHC1P29353 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.74■□□□□ 0.27
SHC1P29353 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SHC1P29353 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.74■□□□□ 0.27
SHC1P29353 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SHC1P29353 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
SHC1P29353 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SHC1P29353 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.74■□□□□ 0.27
SHC1P29353 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHC1P29353 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHC1P29353 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SHC1P29353 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SHC1P29353 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SHC1P29353 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SHC1P29353 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.73■□□□□ 0.27
SHC1P29353 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SHC1P29353 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SHC1P29353 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHC1P29353 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHC1P29353 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.73■□□□□ 0.27
SHC1P29353 GCSHP2-201ENST00000560971 527 ntBASIC16.73■□□□□ 0.27
SHC1P29353 NEK4P2-201ENST00000580004 1012 ntBASIC16.73■□□□□ 0.27
SHC1P29353 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.73■□□□□ 0.27
SHC1P29353 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.73■□□□□ 0.27
SHC1P29353 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SHC1P29353 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
SHC1P29353 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SHC1P29353 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SHC1P29353 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SHC1P29353 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHC1P29353 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHC1P29353 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHC1P29353 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHC1P29353 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHC1P29353 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHC1P29353 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SHC1P29353 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SHC1P29353 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHC1P29353 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.73■□□□□ 0.27
SHC1P29353 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SHC1P29353 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SHC1P29353 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHC1P29353 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SHC1P29353 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHC1P29353 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.72■□□□□ 0.27
SHC1P29353 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.72■□□□□ 0.27
SHC1P29353 KRT8P50-201ENST00000562022 1438 ntBASIC16.72■□□□□ 0.27
SHC1P29353 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.72■□□□□ 0.27
SHC1P29353 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SHC1P29353 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.72■□□□□ 0.27
SHC1P29353 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.72■□□□□ 0.27
SHC1P29353 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.72■□□□□ 0.27
SHC1P29353 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
SHC1P29353 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms