Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.37■□□□□ 0.53
MMP2P08253 LINC01238-205ENST00000567549 1107 ntBASIC18.37■□□□□ 0.53
MMP2P08253 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
MMP2P08253 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.37■□□□□ 0.53
MMP2P08253 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MMP2P08253 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.37■□□□□ 0.53
MMP2P08253 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.37■□□□□ 0.53
MMP2P08253 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MMP2P08253 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MMP2P08253 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
MMP2P08253 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
MMP2P08253 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MMP2P08253 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
MMP2P08253 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MMP2P08253 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MMP2P08253 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.37■□□□□ 0.53
MMP2P08253 AC138028.4-201ENST00000564984 1845 ntBASIC18.37■□□□□ 0.53
MMP2P08253 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.37■□□□□ 0.53
MMP2P08253 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MMP2P08253 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MMP2P08253 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MMP2P08253 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.37■□□□□ 0.53
MMP2P08253 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MMP2P08253 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
MMP2P08253 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
MMP2P08253 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
MMP2P08253 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MMP2P08253 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
MMP2P08253 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MMP2P08253 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MMP2P08253 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
MMP2P08253 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
MMP2P08253 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
MMP2P08253 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.36■□□□□ 0.53
MMP2P08253 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.36■□□□□ 0.53
MMP2P08253 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.36■□□□□ 0.53
MMP2P08253 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MMP2P08253 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
MMP2P08253 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.36■□□□□ 0.53
MMP2P08253 ZNF444P1-201ENST00000559497 298 ntBASIC18.36■□□□□ 0.53
MMP2P08253 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.36■□□□□ 0.53
MMP2P08253 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
MMP2P08253 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MMP2P08253 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
MMP2P08253 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
MMP2P08253 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.36■□□□□ 0.53
MMP2P08253 AP000997.3-201ENST00000623333 2250 ntBASIC18.35■□□□□ 0.53
MMP2P08253 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
MMP2P08253 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MMP2P08253 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MMP2P08253 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MMP2P08253 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
MMP2P08253 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.35■□□□□ 0.53
MMP2P08253 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MMP2P08253 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.35■□□□□ 0.53
MMP2P08253 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.35■□□□□ 0.53
MMP2P08253 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MMP2P08253 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MMP2P08253 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MMP2P08253 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
MMP2P08253 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MMP2P08253 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MMP2P08253 KRT18P48-201ENST00000434763 852 ntBASIC18.35■□□□□ 0.53
MMP2P08253 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.35■□□□□ 0.53
MMP2P08253 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.35■□□□□ 0.53
MMP2P08253 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.35■□□□□ 0.53
MMP2P08253 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.35■□□□□ 0.53
MMP2P08253 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MMP2P08253 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
MMP2P08253 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
MMP2P08253 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MMP2P08253 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MMP2P08253 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MMP2P08253 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MMP2P08253 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
MMP2P08253 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MMP2P08253 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MMP2P08253 LINC00602-201ENST00000629776 2065 ntBASIC18.34■□□□□ 0.53
MMP2P08253 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.34■□□□□ 0.53
MMP2P08253 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MMP2P08253 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MMP2P08253 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MMP2P08253 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MMP2P08253 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MMP2P08253 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MMP2P08253 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.34■□□□□ 0.53
MMP2P08253 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MMP2P08253 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MMP2P08253 RNF126P1-202ENST00000569893 925 ntBASIC18.34■□□□□ 0.53
MMP2P08253 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.34■□□□□ 0.53
MMP2P08253 AC008687.5-201ENST00000593746 558 ntBASIC18.34■□□□□ 0.53
MMP2P08253 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.34■□□□□ 0.53
MMP2P08253 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.34■□□□□ 0.53
MMP2P08253 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
MMP2P08253 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.34■□□□□ 0.53
MMP2P08253 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MMP2P08253 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
MMP2P08253 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.34■□□□□ 0.53
MMP2P08253 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MMP2P08253 FLJ13224-201ENST00000313737 1514 ntBASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms