Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 AC005224.4-201ENST00000583262 1652 ntBASIC14.71□□□□□ -0.05
APOC3P02656 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
APOC3P02656 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
APOC3P02656 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
APOC3P02656 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.71□□□□□ -0.05
APOC3P02656 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
APOC3P02656 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC14.71□□□□□ -0.05
APOC3P02656 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
APOC3P02656 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.71□□□□□ -0.05
APOC3P02656 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
APOC3P02656 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
APOC3P02656 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
APOC3P02656 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
APOC3P02656 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
APOC3P02656 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
APOC3P02656 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC14.71□□□□□ -0.05
APOC3P02656 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC14.71□□□□□ -0.05
APOC3P02656 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC14.71□□□□□ -0.05
APOC3P02656 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC14.71□□□□□ -0.05
APOC3P02656 PVT1_1.1-201ENST00000615125 194 ntBASIC14.71□□□□□ -0.05
APOC3P02656 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
APOC3P02656 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
APOC3P02656 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
APOC3P02656 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
APOC3P02656 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
APOC3P02656 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC14.71□□□□□ -0.05
APOC3P02656 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
APOC3P02656 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
APOC3P02656 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
APOC3P02656 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
APOC3P02656 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.71□□□□□ -0.06
APOC3P02656 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.7□□□□□ -0.06
APOC3P02656 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
APOC3P02656 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
APOC3P02656 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
APOC3P02656 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
APOC3P02656 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC14.7□□□□□ -0.06
APOC3P02656 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
APOC3P02656 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.7□□□□□ -0.06
APOC3P02656 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
APOC3P02656 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
APOC3P02656 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
APOC3P02656 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
APOC3P02656 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
APOC3P02656 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
APOC3P02656 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
APOC3P02656 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
APOC3P02656 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
APOC3P02656 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC14.7□□□□□ -0.06
APOC3P02656 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
APOC3P02656 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC14.7□□□□□ -0.06
APOC3P02656 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC14.7□□□□□ -0.06
APOC3P02656 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC14.7□□□□□ -0.06
APOC3P02656 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC14.7□□□□□ -0.06
APOC3P02656 AC099791.2-201ENST00000605725 427 ntBASIC14.7□□□□□ -0.06
APOC3P02656 AL031963.3-201ENST00000606441 850 ntBASIC14.7□□□□□ -0.06
APOC3P02656 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.7□□□□□ -0.06
APOC3P02656 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
APOC3P02656 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
APOC3P02656 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.7□□□□□ -0.06
APOC3P02656 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
APOC3P02656 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
APOC3P02656 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
APOC3P02656 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
APOC3P02656 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
APOC3P02656 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
APOC3P02656 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
APOC3P02656 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC14.69□□□□□ -0.06
APOC3P02656 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.69□□□□□ -0.06
APOC3P02656 AC006116.8-202ENST00000587620 1550 ntBASIC14.69□□□□□ -0.06
APOC3P02656 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
APOC3P02656 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
APOC3P02656 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.69□□□□□ -0.06
APOC3P02656 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
APOC3P02656 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
APOC3P02656 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
APOC3P02656 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.69□□□□□ -0.06
APOC3P02656 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
APOC3P02656 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
APOC3P02656 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
APOC3P02656 RPS2P35-201ENST00000443417 897 ntBASIC14.69□□□□□ -0.06
APOC3P02656 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
APOC3P02656 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
APOC3P02656 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
APOC3P02656 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC14.69□□□□□ -0.06
APOC3P02656 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
APOC3P02656 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
APOC3P02656 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC14.69□□□□□ -0.06
APOC3P02656 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
APOC3P02656 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
APOC3P02656 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
APOC3P02656 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOC3P02656 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
APOC3P02656 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
APOC3P02656 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
APOC3P02656 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOC3P02656 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOC3P02656 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
APOC3P02656 HLA-DQB1-201ENST00000374943 1656 ntBASIC14.68□□□□□ -0.06
APOC3P02656 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms