Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.37■□□□□ 0.53
VAPBO95292 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
VAPBO95292 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
VAPBO95292 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VAPBO95292 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
VAPBO95292 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VAPBO95292 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VAPBO95292 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
VAPBO95292 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VAPBO95292 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VAPBO95292 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VAPBO95292 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
VAPBO95292 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VAPBO95292 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VAPBO95292 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.36■□□□□ 0.53
VAPBO95292 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.36■□□□□ 0.53
VAPBO95292 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VAPBO95292 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VAPBO95292 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.36■□□□□ 0.53
VAPBO95292 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.36■□□□□ 0.53
VAPBO95292 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.36■□□□□ 0.53
VAPBO95292 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
VAPBO95292 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.36■□□□□ 0.53
VAPBO95292 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.36■□□□□ 0.53
VAPBO95292 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.36■□□□□ 0.53
VAPBO95292 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VAPBO95292 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
VAPBO95292 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.36■□□□□ 0.53
VAPBO95292 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VAPBO95292 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
VAPBO95292 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VAPBO95292 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
VAPBO95292 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.35■□□□□ 0.53
VAPBO95292 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
VAPBO95292 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VAPBO95292 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VAPBO95292 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
VAPBO95292 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VAPBO95292 AC008764.6-201ENST00000595909 2069 ntBASIC18.35■□□□□ 0.53
VAPBO95292 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
VAPBO95292 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
VAPBO95292 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VAPBO95292 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
VAPBO95292 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VAPBO95292 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VAPBO95292 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.35■□□□□ 0.53
VAPBO95292 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VAPBO95292 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.35■□□□□ 0.53
VAPBO95292 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
VAPBO95292 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.35■□□□□ 0.53
VAPBO95292 AC009947.2-201ENST00000444014 672 ntBASIC18.35■□□□□ 0.53
VAPBO95292 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.35■□□□□ 0.53
VAPBO95292 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.35■□□□□ 0.53
VAPBO95292 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.35■□□□□ 0.53
VAPBO95292 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.35■□□□□ 0.53
VAPBO95292 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VAPBO95292 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VAPBO95292 FZD10-202ENST00000539839 3282 ntBASIC18.35■□□□□ 0.53
VAPBO95292 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
VAPBO95292 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VAPBO95292 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VAPBO95292 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VAPBO95292 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VAPBO95292 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VAPBO95292 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
VAPBO95292 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VAPBO95292 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VAPBO95292 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
VAPBO95292 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VAPBO95292 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VAPBO95292 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.34■□□□□ 0.53
VAPBO95292 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
VAPBO95292 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VAPBO95292 LINC01568-207ENST00000641790 1380 ntBASIC18.34■□□□□ 0.53
VAPBO95292 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VAPBO95292 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VAPBO95292 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
VAPBO95292 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VAPBO95292 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VAPBO95292 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.34■□□□□ 0.53
VAPBO95292 HMGA1P5-201ENST00000412453 271 ntBASIC18.34■□□□□ 0.53
VAPBO95292 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VAPBO95292 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VAPBO95292 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VAPBO95292 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
VAPBO95292 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VAPBO95292 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VAPBO95292 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VAPBO95292 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VAPBO95292 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VAPBO95292 AC009065.1-201ENST00000564055 1225 ntBASIC18.34■□□□□ 0.53
VAPBO95292 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.34■□□□□ 0.53
VAPBO95292 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VAPBO95292 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VAPBO95292 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.34■□□□□ 0.53
VAPBO95292 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VAPBO95292 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
VAPBO95292 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
VAPBO95292 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.34■□□□□ 0.53
VAPBO95292 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms