Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.22■□□□□ 0.51
PCDH8O95206 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.22■□□□□ 0.51
PCDH8O95206 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH8O95206 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDH8O95206 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH8O95206 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PCDH8O95206 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
PCDH8O95206 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH8O95206 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PCDH8O95206 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH8O95206 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH8O95206 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
PCDH8O95206 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH8O95206 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH8O95206 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDH8O95206 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH8O95206 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH8O95206 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDH8O95206 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH8O95206 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH8O95206 FOSL1P1-201ENST00000511041 816 ntBASIC18.21■□□□□ 0.51
PCDH8O95206 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH8O95206 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDH8O95206 AC111152.3-201ENST00000569699 673 ntBASIC18.21■□□□□ 0.51
PCDH8O95206 AC011840.4-201ENST00000578471 627 ntBASIC18.21■□□□□ 0.51
PCDH8O95206 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
PCDH8O95206 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.21■□□□□ 0.51
PCDH8O95206 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
PCDH8O95206 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PCDH8O95206 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
PCDH8O95206 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH8O95206 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
PCDH8O95206 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH8O95206 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH8O95206 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
PCDH8O95206 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH8O95206 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH8O95206 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH8O95206 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDH8O95206 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH8O95206 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH8O95206 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH8O95206 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH8O95206 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
PCDH8O95206 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDH8O95206 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDH8O95206 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH8O95206 RN7SL606P-201ENST00000472779 293 ntBASIC18.2■□□□□ 0.5
PCDH8O95206 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.2■□□□□ 0.5
PCDH8O95206 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH8O95206 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.2■□□□□ 0.5
PCDH8O95206 AL121772.3-201ENST00000610840 674 ntBASIC18.2■□□□□ 0.5
PCDH8O95206 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDH8O95206 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH8O95206 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH8O95206 AL024508.2-201ENST00000607749 1894 ntBASIC18.2■□□□□ 0.5
PCDH8O95206 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDH8O95206 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH8O95206 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
PCDH8O95206 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
PCDH8O95206 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH8O95206 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH8O95206 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDH8O95206 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH8O95206 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH8O95206 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDH8O95206 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDH8O95206 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDH8O95206 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.19■□□□□ 0.5
PCDH8O95206 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PCDH8O95206 KRT17P6-201ENST00000453795 1220 ntBASIC18.19■□□□□ 0.5
PCDH8O95206 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.19■□□□□ 0.5
PCDH8O95206 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH8O95206 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH8O95206 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
PCDH8O95206 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDH8O95206 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.19■□□□□ 0.5
PCDH8O95206 AC138894.3-201ENST00000603787 634 ntBASIC18.19■□□□□ 0.5
PCDH8O95206 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH8O95206 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH8O95206 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH8O95206 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDH8O95206 AC090340.1-201ENST00000620778 4980 ntBASIC18.19■□□□□ 0.5
PCDH8O95206 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH8O95206 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH8O95206 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDH8O95206 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDH8O95206 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH8O95206 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PCDH8O95206 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH8O95206 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH8O95206 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PCDH8O95206 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH8O95206 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PCDH8O95206 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH8O95206 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH8O95206 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH8O95206 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH8O95206 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDH8O95206 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms