Protein–RNA interactions for Protein: O60337

MARCH6, E3 ubiquitin-protein ligase MARCH6, humanhuman

Predictions only

Length 910 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MARCH6O60337 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
MARCH6O60337 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
MARCH6O60337 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
MARCH6O60337 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
MARCH6O60337 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MARCH6O60337 FAM8A6P-201ENST00000407496 1135 ntBASIC20.82■□□□□ 0.92
MARCH6O60337 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.82■□□□□ 0.92
MARCH6O60337 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.82■□□□□ 0.92
MARCH6O60337 AC073592.3-201ENST00000625118 1834 ntBASIC20.82■□□□□ 0.92
MARCH6O60337 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
MARCH6O60337 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
MARCH6O60337 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
MARCH6O60337 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MARCH6O60337 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MARCH6O60337 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.81■□□□□ 0.92
MARCH6O60337 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MARCH6O60337 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MARCH6O60337 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MARCH6O60337 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
MARCH6O60337 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MARCH6O60337 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.81■□□□□ 0.92
MARCH6O60337 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MARCH6O60337 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.81■□□□□ 0.92
MARCH6O60337 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
MARCH6O60337 MIR1224-201ENST00000408193 85 ntBASIC20.81■□□□□ 0.92
MARCH6O60337 SPDYE15P-201ENST00000424157 909 ntBASIC20.81■□□□□ 0.92
MARCH6O60337 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
MARCH6O60337 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MARCH6O60337 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.81■□□□□ 0.92
MARCH6O60337 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MARCH6O60337 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MARCH6O60337 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
MARCH6O60337 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MARCH6O60337 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MARCH6O60337 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
MARCH6O60337 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MARCH6O60337 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
MARCH6O60337 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
MARCH6O60337 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.8■□□□□ 0.92
MARCH6O60337 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.8■□□□□ 0.92
MARCH6O60337 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
MARCH6O60337 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MARCH6O60337 AC104581.1-202ENST00000635932 2618 ntBASIC20.8■□□□□ 0.92
MARCH6O60337 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MARCH6O60337 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MARCH6O60337 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MARCH6O60337 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MARCH6O60337 AC112907.2-201ENST00000448639 330 ntBASIC20.8■□□□□ 0.92
MARCH6O60337 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.8■□□□□ 0.92
MARCH6O60337 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
MARCH6O60337 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.8■□□□□ 0.92
MARCH6O60337 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
MARCH6O60337 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.8■□□□□ 0.92
MARCH6O60337 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MARCH6O60337 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MARCH6O60337 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MARCH6O60337 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.8■□□□□ 0.92
MARCH6O60337 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
MARCH6O60337 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
MARCH6O60337 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MARCH6O60337 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.8■□□□□ 0.92
MARCH6O60337 AC090164.3-201ENST00000610780 2143 ntBASIC20.8■□□□□ 0.92
MARCH6O60337 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
MARCH6O60337 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MARCH6O60337 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MARCH6O60337 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MARCH6O60337 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MARCH6O60337 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MARCH6O60337 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.79■□□□□ 0.92
MARCH6O60337 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MARCH6O60337 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.79■□□□□ 0.92
MARCH6O60337 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
MARCH6O60337 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.79■□□□□ 0.92
MARCH6O60337 KRT18P38-201ENST00000449496 1282 ntBASIC20.79■□□□□ 0.92
MARCH6O60337 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.79■□□□□ 0.92
MARCH6O60337 NTF6B-201ENST00000591913 560 ntBASIC20.79■□□□□ 0.92
MARCH6O60337 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.79■□□□□ 0.92
MARCH6O60337 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MARCH6O60337 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.79■□□□□ 0.92
MARCH6O60337 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
MARCH6O60337 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MARCH6O60337 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.79■□□□□ 0.92
MARCH6O60337 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.79■□□□□ 0.92
MARCH6O60337 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.79■□□□□ 0.92
MARCH6O60337 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.78■□□□□ 0.92
MARCH6O60337 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MARCH6O60337 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MARCH6O60337 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.78■□□□□ 0.92
MARCH6O60337 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MARCH6O60337 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MARCH6O60337 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
MARCH6O60337 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
MARCH6O60337 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MARCH6O60337 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MARCH6O60337 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
MARCH6O60337 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MARCH6O60337 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.78■□□□□ 0.92
MARCH6O60337 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MARCH6O60337 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MARCH6O60337 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms