Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDE6DO43924 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC14.17□□□□□ -0.14
PDE6DO43924 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
PDE6DO43924 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDE6DO43924 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PDE6DO43924 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC14.17□□□□□ -0.14
PDE6DO43924 AL356309.3-201ENST00000624132 1934 ntBASIC14.17□□□□□ -0.14
PDE6DO43924 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDE6DO43924 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDE6DO43924 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDE6DO43924 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDE6DO43924 AL138688.1-201ENST00000624851 1594 ntBASIC14.17□□□□□ -0.14
PDE6DO43924 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDE6DO43924 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDE6DO43924 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDE6DO43924 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDE6DO43924 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDE6DO43924 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC14.16□□□□□ -0.14
PDE6DO43924 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDE6DO43924 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PDE6DO43924 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC14.16□□□□□ -0.14
PDE6DO43924 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC14.16□□□□□ -0.14
PDE6DO43924 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDE6DO43924 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.16□□□□□ -0.14
PDE6DO43924 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDE6DO43924 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PDE6DO43924 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PDE6DO43924 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
PDE6DO43924 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
PDE6DO43924 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PDE6DO43924 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
PDE6DO43924 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PDE6DO43924 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDE6DO43924 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDE6DO43924 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PDE6DO43924 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PDE6DO43924 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PDE6DO43924 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PDE6DO43924 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.16□□□□□ -0.14
PDE6DO43924 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC14.16□□□□□ -0.14
PDE6DO43924 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
PDE6DO43924 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PDE6DO43924 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDE6DO43924 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDE6DO43924 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC14.16□□□□□ -0.14
PDE6DO43924 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PDE6DO43924 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDE6DO43924 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.16□□□□□ -0.14
PDE6DO43924 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDE6DO43924 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC14.15□□□□□ -0.14
PDE6DO43924 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
PDE6DO43924 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDE6DO43924 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
PDE6DO43924 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.15□□□□□ -0.14
PDE6DO43924 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.15□□□□□ -0.14
PDE6DO43924 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
PDE6DO43924 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDE6DO43924 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDE6DO43924 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDE6DO43924 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDE6DO43924 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PDE6DO43924 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDE6DO43924 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC14.15□□□□□ -0.14
PDE6DO43924 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
PDE6DO43924 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
PDE6DO43924 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PDE6DO43924 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDE6DO43924 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
PDE6DO43924 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDE6DO43924 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDE6DO43924 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDE6DO43924 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC14.15□□□□□ -0.14
PDE6DO43924 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
PDE6DO43924 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PDE6DO43924 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
PDE6DO43924 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC14.15□□□□□ -0.14
PDE6DO43924 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PDE6DO43924 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC14.15□□□□□ -0.14
PDE6DO43924 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC14.15□□□□□ -0.14
PDE6DO43924 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
PDE6DO43924 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDE6DO43924 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PDE6DO43924 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDE6DO43924 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC14.15□□□□□ -0.14
PDE6DO43924 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDE6DO43924 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDE6DO43924 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDE6DO43924 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDE6DO43924 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
PDE6DO43924 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
PDE6DO43924 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDE6DO43924 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDE6DO43924 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.15
PDE6DO43924 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
PDE6DO43924 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC14.14□□□□□ -0.15
PDE6DO43924 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC14.14□□□□□ -0.15
PDE6DO43924 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDE6DO43924 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDE6DO43924 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.14□□□□□ -0.15
PDE6DO43924 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms