Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 RASA4DP-201ENST00000460726 1199 ntBASIC16.28■□□□□ 0.2
TRAF3IP2O43734 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.28■□□□□ 0.2
TRAF3IP2O43734 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.28■□□□□ 0.2
TRAF3IP2O43734 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
TRAF3IP2O43734 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TRAF3IP2O43734 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.28■□□□□ 0.2
TRAF3IP2O43734 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF3IP2O43734 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF3IP2O43734 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF3IP2O43734 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF3IP2O43734 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.28■□□□□ 0.2
TRAF3IP2O43734 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.28■□□□□ 0.2
TRAF3IP2O43734 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
TRAF3IP2O43734 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.27■□□□□ 0.2
TRAF3IP2O43734 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRAF3IP2O43734 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAF3IP2O43734 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAF3IP2O43734 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRAF3IP2O43734 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRAF3IP2O43734 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.27■□□□□ 0.2
TRAF3IP2O43734 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAF3IP2O43734 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
TRAF3IP2O43734 AC007613.1-201ENST00000572811 2597 ntBASIC16.27■□□□□ 0.2
TRAF3IP2O43734 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAF3IP2O43734 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAF3IP2O43734 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAF3IP2O43734 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.27■□□□□ 0.2
TRAF3IP2O43734 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
TRAF3IP2O43734 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRAF3IP2O43734 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TRAF3IP2O43734 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.27■□□□□ 0.2
TRAF3IP2O43734 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRAF3IP2O43734 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.27■□□□□ 0.2
TRAF3IP2O43734 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TRAF3IP2O43734 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.27■□□□□ 0.2
TRAF3IP2O43734 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAF3IP2O43734 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAF3IP2O43734 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAF3IP2O43734 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAF3IP2O43734 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
TRAF3IP2O43734 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.27■□□□□ 0.19
TRAF3IP2O43734 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAF3IP2O43734 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.19
TRAF3IP2O43734 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRAF3IP2O43734 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRAF3IP2O43734 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.27■□□□□ 0.19
TRAF3IP2O43734 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAF3IP2O43734 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF3IP2O43734 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF3IP2O43734 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF3IP2O43734 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF3IP2O43734 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF3IP2O43734 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF3IP2O43734 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF3IP2O43734 AL096828.2-201ENST00000567259 1965 ntBASIC16.26■□□□□ 0.19
TRAF3IP2O43734 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TRAF3IP2O43734 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF3IP2O43734 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF3IP2O43734 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF3IP2O43734 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF3IP2O43734 STARP1-201ENST00000397973 869 ntBASIC16.26■□□□□ 0.19
TRAF3IP2O43734 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.26■□□□□ 0.19
TRAF3IP2O43734 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.26■□□□□ 0.19
TRAF3IP2O43734 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.26■□□□□ 0.19
TRAF3IP2O43734 RN7SL850P-201ENST00000579959 291 ntBASIC16.26■□□□□ 0.19
TRAF3IP2O43734 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF3IP2O43734 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
TRAF3IP2O43734 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAF3IP2O43734 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF3IP2O43734 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF3IP2O43734 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.26■□□□□ 0.19
TRAF3IP2O43734 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAF3IP2O43734 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF3IP2O43734 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
TRAF3IP2O43734 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAF3IP2O43734 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAF3IP2O43734 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAF3IP2O43734 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF3IP2O43734 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF3IP2O43734 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF3IP2O43734 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF3IP2O43734 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TRAF3IP2O43734 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAF3IP2O43734 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAF3IP2O43734 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
TRAF3IP2O43734 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAF3IP2O43734 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.25■□□□□ 0.19
TRAF3IP2O43734 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TRAF3IP2O43734 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAF3IP2O43734 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAF3IP2O43734 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAF3IP2O43734 RNF152P1-201ENST00000397754 604 ntBASIC16.25■□□□□ 0.19
TRAF3IP2O43734 AK4P3-201ENST00000418260 669 ntBASIC16.25■□□□□ 0.19
TRAF3IP2O43734 TSPY5P-201ENST00000426936 936 ntBASIC16.25■□□□□ 0.19
TRAF3IP2O43734 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.25■□□□□ 0.19
TRAF3IP2O43734 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.25■□□□□ 0.19
TRAF3IP2O43734 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.25■□□□□ 0.19
TRAF3IP2O43734 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.25■□□□□ 0.19
TRAF3IP2O43734 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAF3IP2O43734 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms