Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
RNF13O43567 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF13O43567 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF13O43567 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF13O43567 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RNF13O43567 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF13O43567 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF13O43567 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
RNF13O43567 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.65■□□□□ 0.26
RNF13O43567 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.65■□□□□ 0.26
RNF13O43567 KRT18P41-201ENST00000518924 1277 ntBASIC16.65■□□□□ 0.26
RNF13O43567 AP003041.3-201ENST00000527151 707 ntBASIC16.65■□□□□ 0.26
RNF13O43567 C2orf69P3-201ENST00000565542 1120 ntBASIC16.65■□□□□ 0.26
RNF13O43567 MIR4497-201ENST00000583208 89 ntBASIC16.65■□□□□ 0.26
RNF13O43567 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.65■□□□□ 0.26
RNF13O43567 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF13O43567 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF13O43567 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF13O43567 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.65■□□□□ 0.26
RNF13O43567 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF13O43567 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
RNF13O43567 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
RNF13O43567 AC036111.1-201ENST00000533973 1582 ntBASIC16.64■□□□□ 0.25
RNF13O43567 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF13O43567 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.64■□□□□ 0.25
RNF13O43567 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF13O43567 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF13O43567 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF13O43567 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF13O43567 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF13O43567 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF13O43567 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.25
RNF13O43567 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF13O43567 AP000593.1-201ENST00000393668 712 ntBASIC16.64■□□□□ 0.25
RNF13O43567 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF13O43567 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.64■□□□□ 0.25
RNF13O43567 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF13O43567 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.64■□□□□ 0.25
RNF13O43567 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.64■□□□□ 0.25
RNF13O43567 AL353719.1-201ENST00000566847 864 ntBASIC16.64■□□□□ 0.25
RNF13O43567 MIR4674-201ENST00000582457 87 ntBASIC16.64■□□□□ 0.25
RNF13O43567 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.64■□□□□ 0.25
RNF13O43567 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.64■□□□□ 0.25
RNF13O43567 AC116562.4-202ENST00000641738 218 ntBASIC16.64■□□□□ 0.25
RNF13O43567 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.64■□□□□ 0.25
RNF13O43567 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF13O43567 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF13O43567 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF13O43567 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF13O43567 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF13O43567 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF13O43567 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF13O43567 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF13O43567 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF13O43567 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RNF13O43567 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RNF13O43567 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF13O43567 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.63■□□□□ 0.25
RNF13O43567 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
RNF13O43567 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF13O43567 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.63■□□□□ 0.25
RNF13O43567 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.63■□□□□ 0.25
RNF13O43567 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.63■□□□□ 0.25
RNF13O43567 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF13O43567 AL023803.3-201ENST00000615559 522 ntBASIC16.63■□□□□ 0.25
RNF13O43567 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF13O43567 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
RNF13O43567 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF13O43567 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.63■□□□□ 0.25
RNF13O43567 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.63■□□□□ 0.25
RNF13O43567 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF13O43567 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF13O43567 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RNF13O43567 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF13O43567 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
RNF13O43567 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RNF13O43567 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF13O43567 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF13O43567 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RNF13O43567 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF13O43567 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF13O43567 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF13O43567 GNAS-203ENST00000306120 1878 ntBASIC16.63■□□□□ 0.25
RNF13O43567 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF13O43567 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF13O43567 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RNF13O43567 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.62■□□□□ 0.25
RNF13O43567 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF13O43567 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RNF13O43567 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RNF13O43567 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF13O43567 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF13O43567 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF13O43567 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF13O43567 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.62■□□□□ 0.25
RNF13O43567 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF13O43567 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF13O43567 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF13O43567 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF13O43567 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms