Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
TVP23AA6NH52 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TVP23AA6NH52 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TVP23AA6NH52 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TVP23AA6NH52 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.33■□□□□ 0.2
TVP23AA6NH52 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TVP23AA6NH52 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TVP23AA6NH52 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TVP23AA6NH52 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TVP23AA6NH52 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TVP23AA6NH52 CA15P1-201ENST00000481698 905 ntBASIC16.33■□□□□ 0.2
TVP23AA6NH52 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.33■□□□□ 0.2
TVP23AA6NH52 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.33■□□□□ 0.2
TVP23AA6NH52 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.33■□□□□ 0.2
TVP23AA6NH52 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.33■□□□□ 0.2
TVP23AA6NH52 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
TVP23AA6NH52 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TVP23AA6NH52 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TVP23AA6NH52 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TVP23AA6NH52 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TVP23AA6NH52 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TVP23AA6NH52 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TVP23AA6NH52 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.33■□□□□ 0.2
TVP23AA6NH52 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.33■□□□□ 0.2
TVP23AA6NH52 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TVP23AA6NH52 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TVP23AA6NH52 AC134043.2-201ENST00000624206 2238 ntBASIC16.33■□□□□ 0.2
TVP23AA6NH52 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TVP23AA6NH52 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.33■□□□□ 0.2
TVP23AA6NH52 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.33■□□□□ 0.2
TVP23AA6NH52 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
TVP23AA6NH52 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TVP23AA6NH52 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TVP23AA6NH52 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.32■□□□□ 0.2
TVP23AA6NH52 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.32■□□□□ 0.2
TVP23AA6NH52 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TVP23AA6NH52 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TVP23AA6NH52 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TVP23AA6NH52 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TVP23AA6NH52 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TVP23AA6NH52 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TVP23AA6NH52 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TVP23AA6NH52 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TVP23AA6NH52 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TVP23AA6NH52 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.32■□□□□ 0.2
TVP23AA6NH52 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.32■□□□□ 0.2
TVP23AA6NH52 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
TVP23AA6NH52 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TVP23AA6NH52 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.32■□□□□ 0.2
TVP23AA6NH52 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TVP23AA6NH52 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
TVP23AA6NH52 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.32■□□□□ 0.2
TVP23AA6NH52 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TVP23AA6NH52 AP003071.4-201ENST00000562276 1284 ntBASIC16.32■□□□□ 0.2
TVP23AA6NH52 AL096828.2-201ENST00000567259 1965 ntBASIC16.32■□□□□ 0.2
TVP23AA6NH52 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.32■□□□□ 0.2
TVP23AA6NH52 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.32■□□□□ 0.2
TVP23AA6NH52 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TVP23AA6NH52 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.32■□□□□ 0.2
TVP23AA6NH52 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TVP23AA6NH52 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TVP23AA6NH52 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TVP23AA6NH52 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
TVP23AA6NH52 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TVP23AA6NH52 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TVP23AA6NH52 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
TVP23AA6NH52 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.31■□□□□ 0.2
TVP23AA6NH52 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TVP23AA6NH52 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
TVP23AA6NH52 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TVP23AA6NH52 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.31■□□□□ 0.2
TVP23AA6NH52 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.31■□□□□ 0.2
TVP23AA6NH52 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TVP23AA6NH52 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TVP23AA6NH52 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TVP23AA6NH52 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TVP23AA6NH52 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TVP23AA6NH52 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.31■□□□□ 0.2
TVP23AA6NH52 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TVP23AA6NH52 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TVP23AA6NH52 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TVP23AA6NH52 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TVP23AA6NH52 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TVP23AA6NH52 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.31■□□□□ 0.2
TVP23AA6NH52 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.31■□□□□ 0.2
TVP23AA6NH52 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.31■□□□□ 0.2
TVP23AA6NH52 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.31■□□□□ 0.2
TVP23AA6NH52 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.31■□□□□ 0.2
TVP23AA6NH52 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.31■□□□□ 0.2
TVP23AA6NH52 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TVP23AA6NH52 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.31■□□□□ 0.2
TVP23AA6NH52 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.31■□□□□ 0.2
TVP23AA6NH52 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.31■□□□□ 0.2
TVP23AA6NH52 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.31■□□□□ 0.2
TVP23AA6NH52 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.31■□□□□ 0.2
TVP23AA6NH52 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TVP23AA6NH52 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TVP23AA6NH52 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TVP23AA6NH52 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.31■□□□□ 0.2
TVP23AA6NH52 AP000997.3-201ENST00000623333 2250 ntBASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms