Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM49BA6NDI0 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.13■□□□□ 0.81
TRIM49BA6NDI0 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM49BA6NDI0 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM49BA6NDI0 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
TRIM49BA6NDI0 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM49BA6NDI0 SEC1P-202ENST00000473944 940 ntBASIC20.13■□□□□ 0.81
TRIM49BA6NDI0 AC093827.2-201ENST00000512654 315 ntBASIC20.13■□□□□ 0.81
TRIM49BA6NDI0 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.13■□□□□ 0.81
TRIM49BA6NDI0 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.13■□□□□ 0.81
TRIM49BA6NDI0 AC010240.3-201ENST00000607688 395 ntBASIC20.13■□□□□ 0.81
TRIM49BA6NDI0 AC024243.1-201ENST00000609234 778 ntBASIC20.13■□□□□ 0.81
TRIM49BA6NDI0 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.13■□□□□ 0.81
TRIM49BA6NDI0 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM49BA6NDI0 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
TRIM49BA6NDI0 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM49BA6NDI0 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
TRIM49BA6NDI0 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM49BA6NDI0 AC093010.1-201ENST00000473625 1624 ntBASIC20.13■□□□□ 0.81
TRIM49BA6NDI0 AC012317.2-201ENST00000623305 2251 ntBASIC20.13■□□□□ 0.81
TRIM49BA6NDI0 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
TRIM49BA6NDI0 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM49BA6NDI0 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM49BA6NDI0 LINC00896-202ENST00000609602 2128 ntBASIC20.12■□□□□ 0.81
TRIM49BA6NDI0 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM49BA6NDI0 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
TRIM49BA6NDI0 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
TRIM49BA6NDI0 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM49BA6NDI0 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC20.12■□□□□ 0.81
TRIM49BA6NDI0 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM49BA6NDI0 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM49BA6NDI0 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.12■□□□□ 0.81
TRIM49BA6NDI0 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
TRIM49BA6NDI0 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.12■□□□□ 0.81
TRIM49BA6NDI0 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.12■□□□□ 0.81
TRIM49BA6NDI0 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM49BA6NDI0 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.12■□□□□ 0.81
TRIM49BA6NDI0 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM49BA6NDI0 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.12■□□□□ 0.81
TRIM49BA6NDI0 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.12■□□□□ 0.81
TRIM49BA6NDI0 AC128688.1-201ENST00000487626 519 ntBASIC20.12■□□□□ 0.81
TRIM49BA6NDI0 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM49BA6NDI0 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM49BA6NDI0 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.12■□□□□ 0.81
TRIM49BA6NDI0 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM49BA6NDI0 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM49BA6NDI0 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
TRIM49BA6NDI0 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM49BA6NDI0 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
TRIM49BA6NDI0 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
TRIM49BA6NDI0 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM49BA6NDI0 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM49BA6NDI0 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
TRIM49BA6NDI0 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM49BA6NDI0 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM49BA6NDI0 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.11■□□□□ 0.81
TRIM49BA6NDI0 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.11■□□□□ 0.81
TRIM49BA6NDI0 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
TRIM49BA6NDI0 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM49BA6NDI0 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.11■□□□□ 0.81
TRIM49BA6NDI0 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.11■□□□□ 0.81
TRIM49BA6NDI0 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.11■□□□□ 0.81
TRIM49BA6NDI0 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM49BA6NDI0 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.11■□□□□ 0.81
TRIM49BA6NDI0 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM49BA6NDI0 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM49BA6NDI0 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
TRIM49BA6NDI0 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.11■□□□□ 0.81
TRIM49BA6NDI0 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.11■□□□□ 0.81
TRIM49BA6NDI0 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM49BA6NDI0 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
TRIM49BA6NDI0 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.11■□□□□ 0.81
TRIM49BA6NDI0 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
TRIM49BA6NDI0 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM49BA6NDI0 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.11■□□□□ 0.81
TRIM49BA6NDI0 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM49BA6NDI0 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
TRIM49BA6NDI0 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
TRIM49BA6NDI0 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM49BA6NDI0 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM49BA6NDI0 LTB4R2-202ENST00000528054 3092 ntBASIC20.11■□□□□ 0.81
TRIM49BA6NDI0 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.11■□□□□ 0.81
TRIM49BA6NDI0 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM49BA6NDI0 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
TRIM49BA6NDI0 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM49BA6NDI0 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM49BA6NDI0 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM49BA6NDI0 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM49BA6NDI0 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.1■□□□□ 0.81
TRIM49BA6NDI0 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM49BA6NDI0 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM49BA6NDI0 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM49BA6NDI0 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.1■□□□□ 0.81
TRIM49BA6NDI0 GNAS-203ENST00000306120 1878 ntBASIC20.1■□□□□ 0.81
TRIM49BA6NDI0 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.1■□□□□ 0.81
TRIM49BA6NDI0 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM49BA6NDI0 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM49BA6NDI0 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM49BA6NDI0 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM49BA6NDI0 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms